Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.48□□□□□ -1.05
PDS5AQ29RF7 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 GMFG-201ENST00000253054 616 ntTSL 5 BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 RN7SKP191-201ENST00000364713 306 ntBASIC8.48□□□□□ -1.05
PDS5AQ29RF7 RNA5SP172-201ENST00000365061 118 ntBASIC8.48□□□□□ -1.05
PDS5AQ29RF7 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 RBBP4P4-201ENST00000398588 1289 ntBASIC8.48□□□□□ -1.05
PDS5AQ29RF7 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 AL079341.1-201ENST00000404701 1207 ntBASIC8.48□□□□□ -1.05
PDS5AQ29RF7 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 SPATA20P1-201ENST00000423089 438 ntBASIC8.48□□□□□ -1.05
PDS5AQ29RF7 PTPN2P1-201ENST00000423212 1072 ntBASIC8.48□□□□□ -1.05
PDS5AQ29RF7 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 AL121916.1-201ENST00000429405 308 ntBASIC8.48□□□□□ -1.05
PDS5AQ29RF7 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 RPL31P11-202ENST00000454082 372 ntBASIC8.48□□□□□ -1.05
PDS5AQ29RF7 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 AP000805.1-201ENST00000471604 784 ntBASIC8.48□□□□□ -1.05
PDS5AQ29RF7 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 RPS4XP21-201ENST00000603814 750 ntBASIC8.48□□□□□ -1.05
PDS5AQ29RF7 AC007255.2-201ENST00000604053 631 ntBASIC8.48□□□□□ -1.05
PDS5AQ29RF7 HTR1DP1-201ENST00000616500 888 ntBASIC8.48□□□□□ -1.05
PDS5AQ29RF7 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 TPTE2P2-201ENST00000403471 1466 ntBASIC8.48□□□□□ -1.05
PDS5AQ29RF7 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
PDS5AQ29RF7 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 RNA5SP152-201ENST00000365184 110 ntBASIC8.47□□□□□ -1.05
PDS5AQ29RF7 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 RPSAP60-201ENST00000415403 880 ntBASIC8.47□□□□□ -1.05
PDS5AQ29RF7 AP003385.1-201ENST00000426387 893 ntBASIC8.47□□□□□ -1.05
PDS5AQ29RF7 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 AC234771.4-201ENST00000441416 730 ntBASIC8.47□□□□□ -1.05
PDS5AQ29RF7 E2F6P3-201ENST00000441743 743 ntBASIC8.47□□□□□ -1.05
PDS5AQ29RF7 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 AC010878.1-201ENST00000456500 1047 ntBASIC8.47□□□□□ -1.05
PDS5AQ29RF7 PSMA6P2-201ENST00000457574 686 ntBASIC8.47□□□□□ -1.05
PDS5AQ29RF7 RPL9P15-201ENST00000491096 532 ntBASIC8.47□□□□□ -1.05
PDS5AQ29RF7 RN7SL569P-201ENST00000494652 288 ntBASIC8.47□□□□□ -1.05
PDS5AQ29RF7 MINOS1P4-201ENST00000515470 318 ntBASIC8.47□□□□□ -1.05
PDS5AQ29RF7 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 ACER3-213ENST00000533873 929 ntTSL 2 BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 AC244100.4-201ENST00000617747 388 ntBASIC8.47□□□□□ -1.05
PDS5AQ29RF7 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 NF1P8-201ENST00000415351 1461 ntBASIC8.47□□□□□ -1.05
PDS5AQ29RF7 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 AC129502.1-201ENST00000623261 1654 ntBASIC8.47□□□□□ -1.05
PDS5AQ29RF7 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
PDS5AQ29RF7 RN7SKP23-201ENST00000625159 4301 ntBASIC8.46□□□□□ -1.05
PDS5AQ29RF7 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
PDS5AQ29RF7 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.46□□□□□ -1.05
PDS5AQ29RF7 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
PDS5AQ29RF7 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
PDS5AQ29RF7 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
PDS5AQ29RF7 AL096816.1-201ENST00000623300 2920 ntBASIC8.46□□□□□ -1.05
PDS5AQ29RF7 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
PDS5AQ29RF7 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
PDS5AQ29RF7 RBMY1A3P-201ENST00000382670 1404 ntBASIC8.46□□□□□ -1.05
PDS5AQ29RF7 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC8.46□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms