Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
RB1P06400 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC7.66□□□□□ -1.18
RB1P06400 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.66□□□□□ -1.18
RB1P06400 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.66□□□□□ -1.18
RB1P06400 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.66□□□□□ -1.18
RB1P06400 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC7.66□□□□□ -1.18
RB1P06400 AL137246.1-201ENST00000607072 977 ntBASIC7.66□□□□□ -1.18
RB1P06400 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.66□□□□□ -1.18
RB1P06400 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
RB1P06400 MRPL57P3-201ENST00000619218 176 ntBASIC7.66□□□□□ -1.18
RB1P06400 TEX41-271ENST00000628213 993 ntTSL 5 BASIC7.66□□□□□ -1.18
RB1P06400 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.66□□□□□ -1.18
RB1P06400 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC7.66□□□□□ -1.18
RB1P06400 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.66□□□□□ -1.18
RB1P06400 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RB1P06400 AL356361.1-201ENST00000400943 1459 ntBASIC7.66□□□□□ -1.18
RB1P06400 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RB1P06400 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RB1P06400 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
RB1P06400 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.66□□□□□ -1.18
RB1P06400 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RB1P06400 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC7.66□□□□□ -1.18
RB1P06400 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
RB1P06400 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RB1P06400 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RB1P06400 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC7.65□□□□□ -1.18
RB1P06400 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RB1P06400 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RB1P06400 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
RB1P06400 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RB1P06400 RNA5SP382-201ENST00000363355 112 ntBASIC7.65□□□□□ -1.18
RB1P06400 RNA5SP472-201ENST00000363868 119 ntBASIC7.65□□□□□ -1.18
RB1P06400 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RB1P06400 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
RB1P06400 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
RB1P06400 THEM7P-201ENST00000419556 672 ntBASIC7.65□□□□□ -1.18
RB1P06400 RPL7AP51-201ENST00000422016 760 ntBASIC7.65□□□□□ -1.18
RB1P06400 AHCYP8-201ENST00000425108 209 ntBASIC7.65□□□□□ -1.18
RB1P06400 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.65□□□□□ -1.18
RB1P06400 DNAJA1P6-201ENST00000437347 354 ntBASIC7.65□□□□□ -1.18
RB1P06400 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.65□□□□□ -1.18
RB1P06400 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RB1P06400 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RB1P06400 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.65□□□□□ -1.18
RB1P06400 UOX-201ENST00000471089 899 ntBASIC7.65□□□□□ -1.18
RB1P06400 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC7.65□□□□□ -1.18
RB1P06400 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.65□□□□□ -1.18
RB1P06400 AC091563.1-201ENST00000520544 490 ntTSL 3 BASIC7.65□□□□□ -1.18
RB1P06400 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC7.65□□□□□ -1.18
RB1P06400 AC090888.3-201ENST00000558917 509 ntBASIC7.65□□□□□ -1.18
RB1P06400 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC7.65□□□□□ -1.18
RB1P06400 MIR378C-201ENST00000578683 81 ntBASIC7.65□□□□□ -1.18
RB1P06400 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC7.65□□□□□ -1.18
RB1P06400 RN7SL126P-201ENST00000616400 299 ntBASIC7.65□□□□□ -1.18
RB1P06400 AC016582.1-202ENST00000636341 2982 ntBASIC7.65□□□□□ -1.18
RB1P06400 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
RB1P06400 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
RB1P06400 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.19
RB1P06400 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
RB1P06400 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
RB1P06400 AC068860.1-201ENST00000623701 3736 ntBASIC7.65□□□□□ -1.19
RB1P06400 AC018765.1-201ENST00000623357 3446 ntBASIC7.65□□□□□ -1.19
RB1P06400 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
RB1P06400 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
RB1P06400 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
RB1P06400 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
RB1P06400 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RB1P06400 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.64□□□□□ -1.19
RB1P06400 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.64□□□□□ -1.19
RB1P06400 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RB1P06400 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
RB1P06400 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RB1P06400 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RB1P06400 AL035563.1-201ENST00000609087 1539 ntBASIC7.64□□□□□ -1.19
RB1P06400 AC126773.4-201ENST00000612545 3043 ntBASIC7.64□□□□□ -1.19
RB1P06400 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RB1P06400 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
RB1P06400 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RB1P06400 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
RB1P06400 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC7.64□□□□□ -1.19
RB1P06400 FBP2P1-202ENST00000424473 530 ntBASIC7.64□□□□□ -1.19
RB1P06400 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC7.64□□□□□ -1.19
RB1P06400 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC7.64□□□□□ -1.19
RB1P06400 RPS7P10-201ENST00000464254 603 ntBASIC7.64□□□□□ -1.19
RB1P06400 PGBD4P1-201ENST00000473644 407 ntBASIC7.64□□□□□ -1.19
RB1P06400 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.64□□□□□ -1.19
RB1P06400 USP9YP2-201ENST00000504503 1000 ntBASIC7.64□□□□□ -1.19
RB1P06400 USP9YP1-201ENST00000513521 1002 ntBASIC7.64□□□□□ -1.19
RB1P06400 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.64□□□□□ -1.19
RB1P06400 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.64□□□□□ -1.19
RB1P06400 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC7.64□□□□□ -1.19
RB1P06400 RPS11-202ENST00000594493 575 ntTSL 3 BASIC7.64□□□□□ -1.19
RB1P06400 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC7.64□□□□□ -1.19
RB1P06400 AL390877.1-201ENST00000605704 214 ntBASIC7.64□□□□□ -1.19
RB1P06400 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.64□□□□□ -1.19
RB1P06400 MIR6503-201ENST00000622884 86 ntBASIC7.64□□□□□ -1.19
RB1P06400 AL355480.1-201ENST00000629041 99 ntBASIC7.64□□□□□ -1.19
RB1P06400 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
RB1P06400 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
RB1P06400 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms