Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RNA5SP389-201ENST00000362610 115 ntBASIC6.58□□□□□ -1.36
SSX4O60224 RNA5SP226-201ENST00000362653 115 ntBASIC6.58□□□□□ -1.36
SSX4O60224 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.58□□□□□ -1.36
SSX4O60224 PHF6-203ENST00000370800 1150 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSX4O60224 MIR431-201ENST00000385266 114 ntBASIC6.58□□□□□ -1.36
SSX4O60224 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SSX4O60224 RNA5SP185-201ENST00000390963 114 ntBASIC6.58□□□□□ -1.36
SSX4O60224 RPL7-203ENST00000396466 762 ntTSL 3 BASIC6.58□□□□□ -1.36
SSX4O60224 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC6.58□□□□□ -1.36
SSX4O60224 RN7SKP236-201ENST00000410635 284 ntBASIC6.58□□□□□ -1.36
SSX4O60224 RN7SKP207-201ENST00000411204 303 ntBASIC6.58□□□□□ -1.36
SSX4O60224 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.58□□□□□ -1.36
SSX4O60224 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.58□□□□□ -1.36
SSX4O60224 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.58□□□□□ -1.36
SSX4O60224 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC6.58□□□□□ -1.36
SSX4O60224 AC018639.1-201ENST00000492994 442 ntBASIC6.58□□□□□ -1.36
SSX4O60224 HMGB3P14-201ENST00000494195 599 ntBASIC6.58□□□□□ -1.36
SSX4O60224 AC097263.1-201ENST00000496795 606 ntBASIC6.58□□□□□ -1.36
SSX4O60224 AC093297.2-201ENST00000503452 738 ntTSL 2 BASIC6.58□□□□□ -1.36
SSX4O60224 AC055733.3-201ENST00000505214 523 ntBASIC6.58□□□□□ -1.36
SSX4O60224 AC010409.2-201ENST00000505780 478 ntBASIC6.58□□□□□ -1.36
SSX4O60224 MRPL49P1-201ENST00000505951 535 ntBASIC6.58□□□□□ -1.36
SSX4O60224 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.58□□□□□ -1.36
SSX4O60224 RN7SKP233-201ENST00000517005 110 ntBASIC6.58□□□□□ -1.36
SSX4O60224 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.58□□□□□ -1.36
SSX4O60224 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSX4O60224 APEX1-214ENST00000557054 888 ntTSL 5 BASIC6.58□□□□□ -1.36
SSX4O60224 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.58□□□□□ -1.36
SSX4O60224 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC6.58□□□□□ -1.36
SSX4O60224 EIF4EBP2P2-201ENST00000563883 333 ntBASIC6.58□□□□□ -1.36
SSX4O60224 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC6.58□□□□□ -1.36
SSX4O60224 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC6.58□□□□□ -1.36
SSX4O60224 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC6.58□□□□□ -1.36
SSX4O60224 OR7E94P-202ENST00000601375 790 ntBASIC6.58□□□□□ -1.36
SSX4O60224 AC087623.4-201ENST00000606593 695 ntBASIC6.58□□□□□ -1.36
SSX4O60224 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.58□□□□□ -1.36
SSX4O60224 AP003072.5-201ENST00000623872 773 ntBASIC6.58□□□□□ -1.36
SSX4O60224 AC241377.2-202ENST00000636462 997 ntBASIC6.58□□□□□ -1.36
SSX4O60224 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSX4O60224 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.58□□□□□ -1.36
SSX4O60224 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSX4O60224 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
SSX4O60224 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SSX4O60224 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
SSX4O60224 OR7E11P-202ENST00000642027 1491 ntBASIC6.58□□□□□ -1.36
SSX4O60224 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSX4O60224 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.58□□□□□ -1.36
SSX4O60224 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.58□□□□□ -1.36
SSX4O60224 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSX4O60224 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.58□□□□□ -1.36
SSX4O60224 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSX4O60224 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSX4O60224 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.58□□□□□ -1.36
SSX4O60224 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 CDY10P-201ENST00000452415 1567 ntBASIC6.57□□□□□ -1.36
SSX4O60224 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC6.57□□□□□ -1.36
SSX4O60224 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
SSX4O60224 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.57□□□□□ -1.36
SSX4O60224 AL157713.1-201ENST00000379752 1531 ntBASIC6.57□□□□□ -1.36
SSX4O60224 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.57□□□□□ -1.36
SSX4O60224 RNA5SP448-201ENST00000363151 111 ntBASIC6.57□□□□□ -1.36
SSX4O60224 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 RNU1-11P-201ENST00000383975 164 ntBASIC6.57□□□□□ -1.36
SSX4O60224 SNORD15A-201ENST00000384214 148 ntBASIC6.57□□□□□ -1.36
SSX4O60224 H2AFZP3-201ENST00000394213 387 ntBASIC6.57□□□□□ -1.36
SSX4O60224 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC6.57□□□□□ -1.36
SSX4O60224 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.57□□□□□ -1.36
SSX4O60224 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.57□□□□□ -1.36
SSX4O60224 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC6.57□□□□□ -1.36
SSX4O60224 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC6.57□□□□□ -1.36
SSX4O60224 AL136455.1-201ENST00000441083 1240 ntBASIC6.57□□□□□ -1.36
SSX4O60224 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC6.57□□□□□ -1.36
SSX4O60224 AC104389.2-201ENST00000450768 887 ntBASIC6.57□□□□□ -1.36
SSX4O60224 AC073648.3-201ENST00000504939 925 ntBASIC6.57□□□□□ -1.36
SSX4O60224 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.57□□□□□ -1.36
SSX4O60224 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.57□□□□□ -1.36
SSX4O60224 BTF3P1-201ENST00000522014 495 ntBASIC6.57□□□□□ -1.36
SSX4O60224 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 SAA3P-201ENST00000533267 365 ntBASIC6.57□□□□□ -1.36
SSX4O60224 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 DPPA3P2-201ENST00000553589 478 ntBASIC6.57□□□□□ -1.36
SSX4O60224 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 AC244090.2-201ENST00000567614 792 ntBASIC6.57□□□□□ -1.36
SSX4O60224 AC012181.2-201ENST00000570210 699 ntBASIC6.57□□□□□ -1.36
SSX4O60224 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 RN7SL473P-201ENST00000580341 299 ntBASIC6.57□□□□□ -1.36
SSX4O60224 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.57□□□□□ -1.36
SSX4O60224 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC6.57□□□□□ -1.36
SSX4O60224 AC090241.1-201ENST00000587732 621 ntBASIC6.57□□□□□ -1.36
SSX4O60224 AC008385.1-201ENST00000604421 355 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms