Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 SFTPA3P-201ENST00000446429 367 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AL451081.2-201ENST00000448115 933 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AC093157.1-205ENST00000449473 1298 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 TXNP3-201ENST00000454560 301 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 PSPC1P2-201ENST00000455130 225 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AC115223.1-201ENST00000466377 870 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AC027338.2-201ENST00000504382 526 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AC108073.1-201ENST00000508231 674 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 RN7SKP197-201ENST00000517077 297 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 MTND6P20-201ENST00000522986 418 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 SNX18P27-201ENST00000523611 779 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 GZMB-205ENST00000526004 819 ntTSL 3 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 KCTD9P4-201ENST00000526766 1166 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 OR4A21P-201ENST00000532759 944 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AC007751.2-201ENST00000534173 291 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AC068631.3-201ENST00000538831 225 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 THAP2-202ENST00000547843 672 ntTSL 2 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AL109628.2-201ENST00000554037 201 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AL591767.3-201ENST00000554632 525 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 PSMA3-AS1-210ENST00000556002 1039 ntTSL 2 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AC023905.1-203ENST00000560180 765 ntTSL 5 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 RN7SL42P-201ENST00000579786 294 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 ANKRD20A19P-203ENST00000602724 295 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AC023513.1-201ENST00000604396 691 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 5S_rRNA.20-201ENST00000612104 118 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 SNX18P10-201ENST00000625014 519 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AC067942.1-201ENST00000488045 1493 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 CAMK2D-213ENST00000514328 1497 ntTSL 5 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 PWRN1-212ENST00000569908 1435 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 KYNUP2-201ENST00000582280 1329 ntBASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 RACK1-201ENST00000376817 965 ntTSL 5 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 RPL5P35-201ENST00000398869 816 ntBASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 RPL7P58-201ENST00000402913 758 ntBASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 OR2W4P-201ENST00000406496 926 ntBASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 SNORA3.1-201ENST00000408166 111 ntBASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 AC004009.1-201ENST00000412413 567 ntTSL 5 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 AC111200.2-201ENST00000418877 505 ntBASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 YBX1P8-201ENST00000421881 943 ntBASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 SNX19-202ENST00000426933 888 ntTSL 2 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 RPL12P19-201ENST00000429825 486 ntBASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 AC104698.1-201ENST00000435671 276 ntBASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 MRPS21P3-201ENST00000436696 262 ntBASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 LIN28AP2-201ENST00000445283 458 ntBASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 AP1B1P1-202ENST00000448124 191 ntBASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 RN7SL395P-201ENST00000462960 291 ntBASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 RPS12P20-201ENST00000464109 380 ntBASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 RN7SL861P-201ENST00000473793 285 ntBASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 AC015820.1-201ENST00000473882 321 ntBASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 RN7SL239P-201ENST00000490061 300 ntBASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 AC123768.2-201ENST00000500941 732 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 SNORA81.2-201ENST00000516868 170 ntBASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 AP001804.1-201ENST00000526868 919 ntBASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.56□□□□□ -1.52
RBFOX3A6NFN3 AL136304.1-201ENST00000607790 509 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms