Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 AC027319.1-201ENST00000591657 511 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 RPSAP66-201ENST00000592196 606 ntBASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 AC005753.1-201ENST00000623837 618 ntBASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 AC079178.2-201ENST00000439323 1624 ntBASIC6.98□□□□□ -1.29
CCDC187A0A096LP49 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AC036108.4-201ENST00000611654 2516 ntBASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AL589826.1-201ENST00000340697 249 ntBASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 SNORA70.5-201ENST00000365519 135 ntBASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 ARSFP1-201ENST00000398758 477 ntBASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AL136100.1-201ENST00000407696 330 ntBASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 RN7SKP268-201ENST00000411107 316 ntBASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 MTND2P11-201ENST00000423638 648 ntBASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AC114402.2-201ENST00000432760 643 ntBASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AL731892.1-201ENST00000437364 1192 ntBASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AC009237.4-201ENST00000441078 238 ntBASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 WDR82P2-201ENST00000444540 928 ntBASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 KF459542.1-201ENST00000450908 553 ntBASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AP001803.1-201ENST00000525668 147 ntBASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 SDHCP4-201ENST00000532834 510 ntBASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 RN7SL66P-201ENST00000582099 264 ntBASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 RPS11-202ENST00000594493 575 ntTSL 3 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AC097381.3-201ENST00000608962 462 ntBASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AC073389.3-201ENST00000609434 935 ntBASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AL354696.1-201ENST00000614652 497 ntBASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AC087392.3-202ENST00000358446 1754 ntBASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC187A0A096LP49 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms