Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC127537.1-201ENST00000418183 748 ntBASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 AC244453.4-201ENST00000419150 388 ntBASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 RPL5P6-201ENST00000425640 886 ntBASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 AL645936.2-201ENST00000430565 928 ntBASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 CYCSP53-201ENST00000455540 265 ntBASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 SETP4-201ENST00000455717 868 ntBASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 RN7SKP253-201ENST00000516424 309 ntBASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 OR4C1P-201ENST00000530880 937 ntBASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 AC023206.1-201ENST00000605824 298 ntBASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 AC003001.2-201ENST00000616294 831 ntBASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 AC078909.2-201ENST00000620584 398 ntBASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 AC119674.1-201ENST00000641611 1210 ntBASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 AP003175.1-201ENST00000641383 6658 ntBASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 TNFSF15-201ENST00000374044 2789 ntBASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 TRIM51HP-202ENST00000530412 1823 ntBASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDK5RAP1Q96SZ6 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 TRIM64EP-201ENST00000531233 1307 ntBASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AC022417.1-201ENST00000624768 1303 ntBASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AL117344.1-201ENST00000407196 616 ntBASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 LARP1P1-201ENST00000407692 292 ntBASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AL161742.1-201ENST00000418154 584 ntBASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 EEF1A1P27-201ENST00000429983 1135 ntBASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AC087499.3-202ENST00000441215 1173 ntBASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AC093799.1-201ENST00000452411 499 ntBASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AC019080.2-201ENST00000453859 394 ntBASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AL583856.1-201ENST00000454078 1101 ntBASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AC079594.1-201ENST00000489757 331 ntBASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 CHCHD2P7-201ENST00000508008 452 ntBASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 LYZ-202ENST00000548839 558 ntTSL 2 BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AC233290.1-201ENST00000553021 1186 ntBASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AC092368.2-201ENST00000565911 600 ntBASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 RN7SL178P-201ENST00000582930 304 ntBASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AC090774.2-201ENST00000584708 322 ntBASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AC024085.1-201ENST00000604299 432 ntBASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AC097065.2-201ENST00000608159 533 ntBASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AC243725.1-201ENST00000637164 436 ntBASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 AC089998.1-201ENST00000548575 3141 ntBASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDK5RAP1Q96SZ6 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms