Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TRIM60P17-201ENST00000415181 719 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 OR7E117P-201ENST00000422682 1112 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 TRIM60P9Y-201ENST00000438459 816 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 RPS19P6-201ENST00000441327 433 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 ARMC8P1-201ENST00000443069 1289 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 TRIM60P11Y-201ENST00000445313 801 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 HGF-207ENST00000453018 721 ntTSL 3 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 RBMY2HP-201ENST00000457961 720 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AC234782.3-201ENST00000461229 433 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 RN7SL19P-201ENST00000462522 306 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 RN7SL58P-201ENST00000473445 294 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 RPL5P15-201ENST00000475870 897 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AC111000.1-201ENST00000514545 713 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 OR4A7P-201ENST00000531463 910 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AC018523.1-201ENST00000534211 512 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AP006296.1-201ENST00000537438 499 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 TDGP1-201ENST00000543961 1229 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 PWRN1-212ENST00000569908 1435 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 NBR2-204ENST00000587322 63 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AL158151.4-201ENST00000600965 507 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 Z99497.2-201ENST00000603634 310 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AC107304.1-201ENST00000604229 296 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 OR7A19P-201ENST00000608051 733 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 U91328.4-201ENST00000608919 517 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AC069234.5-201ENST00000611056 416 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AC007786.3-201ENST00000615154 596 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AC006449.1-201ENST00000616263 571 ntTSL 4 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AC006338.2-201ENST00000616864 791 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 CYCSP41-201ENST00000616920 296 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AC008985.1-201ENST00000624169 2239 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 GAS2-210ENST00000630668 674 ntTSL 5 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 OR7E11P-202ENST00000642027 1491 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 USP9YP3-201ENST00000434481 1766 ntBASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 FMO9P-202ENST00000488458 1535 ntBASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 TMEM161BP1-201ENST00000457388 1457 ntBASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 AC245060.6-201ENST00000624350 8420 ntBASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 TDRD12-201ENST00000421545 1317 ntTSL 5 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 RNU6-609P-201ENST00000365459 107 ntBASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 SNORA7B-201ENST00000384360 139 ntBASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 BET1P1-201ENST00000482276 359 ntBASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 RN7SL182P-201ENST00000496499 300 ntBASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 AC093755.1-201ENST00000512950 1023 ntBASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 AC090589.2-201ENST00000532022 332 ntTSL 3 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 MED31-202ENST00000574128 619 ntTSL 3 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 RN7SL473P-201ENST00000580341 299 ntBASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 MIR4801-201ENST00000582704 82 ntBASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 OR7E94P-202ENST00000601375 790 ntBASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 AC008385.1-201ENST00000604421 355 ntBASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms