Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 RN7SKP225-201ENST00000410405 352 ntBASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 UQCRHP1-204ENST00000424609 274 ntBASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 RPL26P34-201ENST00000431005 451 ntBASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 KIF3AP1-201ENST00000454055 611 ntBASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 TBX5-AS1-203ENST00000531202 822 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 AC018737.1-201ENST00000603900 204 ntBASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 AC004852.1-201ENST00000605206 154 ntBASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 AL731533.2-201ENST00000607898 578 ntBASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 AL022324.3-201ENST00000609330 747 ntBASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 BIN2P2-201ENST00000503900 1303 ntBASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 AC074198.1-201ENST00000506546 1397 ntBASIC5.93□□□□□ -1.46
CCDC71LQ8N9Z2 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 BX284613.1-201ENST00000452221 1641 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 AC007938.1-201ENST00000562524 2902 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 EEF1A1P15-201ENST00000395772 1408 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 AL391380.1-201ENST00000439300 1432 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 RBMX2P2-201ENST00000257020 946 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 RNA5SP238-201ENST00000365464 120 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 CRIP1P3-201ENST00000416794 220 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 GAPDHP73-201ENST00000423411 1007 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 RANP5-201ENST00000427731 655 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 MRPS21P3-201ENST00000436696 262 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 RPL5P27-201ENST00000437011 881 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 AL731892.1-201ENST00000437364 1192 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 LINC02474-202ENST00000441160 1148 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 RPL24P8-201ENST00000446071 474 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 AP1B1P1-202ENST00000448124 191 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 AC133965.1-201ENST00000452984 354 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 TUBB4BP2-201ENST00000454125 798 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 AC017007.3-201ENST00000479865 435 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 RN7SL797P-201ENST00000486314 297 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 AC073896.5-201ENST00000546464 542 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 AC211469.1-201ENST00000604263 394 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 AC111186.1-201ENST00000604684 130 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 AC019322.2-201ENST00000605634 147 ntBASIC5.92□□□□□ -1.46
CCDC71LQ8N9Z2 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms