Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 ANKRD20A19P-203ENST00000602724 295 ntBASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 AC025811.1-201ENST00000604312 472 ntBASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 AL512413.1-201ENST00000606489 382 ntBASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 AC018558.4-201ENST00000622153 281 ntBASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 AC013437.2-201ENST00000639587 677 ntBASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 AC130464.1-201ENST00000416201 1500 ntBASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 SUN3-202ENST00000395572 1348 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TRIM48Q8IWZ4 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 MIR301B-201ENST00000390813 78 ntBASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 CCNB2P1-201ENST00000399411 1150 ntBASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 BCRP8-201ENST00000412037 255 ntBASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 AC092042.2-201ENST00000417304 331 ntBASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 AC093107.1-201ENST00000422772 609 ntBASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 GAPDHP73-201ENST00000423411 1007 ntBASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 MTCO2P23-201ENST00000425216 680 ntBASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 AL645931.1-201ENST00000439737 410 ntBASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 AC004692.1-201ENST00000455430 424 ntBASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 RPL31P53-201ENST00000457065 348 ntBASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 BOLA3P3-201ENST00000505182 232 ntBASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 RNU6-964P-201ENST00000516524 69 ntBASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 REG4-204ENST00000530654 612 ntTSL 5 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 AC027319.1-201ENST00000591657 511 ntTSL 3 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 AL450270.1-201ENST00000606160 391 ntBASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 AC006449.1-201ENST00000616263 571 ntTSL 4 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 AC127071.2-201ENST00000623293 527 ntBASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 AC073342.3-201ENST00000624211 193 ntBASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 TNFSF15-201ENST00000374044 2789 ntBASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 FO393409.1-201ENST00000399325 1372 ntBASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.45□□□□□ -1.22
TRIM48Q8IWZ4 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC100810.3-201ENST00000633189 2240 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC009948.5-201ENST00000624360 4406 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms