Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 RN7SL228P-201ENST00000470060 303 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 GLRXP3-201ENST00000470810 321 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 RN7SL58P-201ENST00000473445 294 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 AC016687.1-201ENST00000482574 353 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 AC104629.1-201ENST00000494226 508 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 RN7SL516P-201ENST00000496127 297 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC6.76□□□□□ -1.33
SUMO3P55854 AC106774.2-201ENST00000510266 406 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 AC138866.1-201ENST00000514522 497 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 SEC11B-201ENST00000518383 499 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC6.76□□□□□ -1.33
SUMO3P55854 OR5F2P-201ENST00000532761 941 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.76□□□□□ -1.33
SUMO3P55854 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC6.76□□□□□ -1.33
SUMO3P55854 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SUMO3P55854 ULK4P3-201ENST00000563895 440 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC6.76□□□□□ -1.33
SUMO3P55854 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC6.76□□□□□ -1.33
SUMO3P55854 RN7SL178P-201ENST00000582930 304 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC6.76□□□□□ -1.33
SUMO3P55854 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC6.76□□□□□ -1.33
SUMO3P55854 BNIP3P35-201ENST00000604530 490 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 AC080112.3-201ENST00000612552 880 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 FAM27E3-202ENST00000614611 340 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC6.76□□□□□ -1.33
SUMO3P55854 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.76□□□□□ -1.33
SUMO3P55854 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.76□□□□□ -1.33
SUMO3P55854 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
SUMO3P55854 AC074276.2-201ENST00000619891 348 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 AC130456.6-201ENST00000623745 765 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC6.76□□□□□ -1.33
SUMO3P55854 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC6.76□□□□□ -1.33
SUMO3P55854 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SUMO3P55854 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 EEF1A1P5-201ENST00000436459 1389 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 CD86-209ENST00000493101 1572 ntTSL 2 BASIC6.76□□□□□ -1.33
SUMO3P55854 CDY11P-201ENST00000447168 1651 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 AC092646.2-201ENST00000431242 2095 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC6.76□□□□□ -1.33
SUMO3P55854 PAH-201ENST00000307000 2466 ntTSL 5 BASIC6.76□□□□□ -1.33
SUMO3P55854 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.76□□□□□ -1.33
SUMO3P55854 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC6.76□□□□□ -1.33
SUMO3P55854 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SUMO3P55854 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.76□□□□□ -1.33
SUMO3P55854 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
SUMO3P55854 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.76□□□□□ -1.33
SUMO3P55854 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 AC022613.3-201ENST00000560740 1346 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
SUMO3P55854 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC6.75□□□□□ -1.33
SUMO3P55854 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
SUMO3P55854 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SUMO3P55854 THAP12P3-201ENST00000456373 2266 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 DLD-205ENST00000440410 1993 ntTSL 2 BASIC6.75□□□□□ -1.33
SUMO3P55854 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SUMO3P55854 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC6.75□□□□□ -1.33
SUMO3P55854 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SUMO3P55854 AC007923.2-201ENST00000584218 1591 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 AC011008.2-201ENST00000624866 3352 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
SUMO3P55854 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SUMO3P55854 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SUMO3P55854 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
SUMO3P55854 RNA5SP260-201ENST00000363849 111 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SUMO3P55854 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SUMO3P55854 SNORA3.1-201ENST00000408166 111 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC6.75□□□□□ -1.33
SUMO3P55854 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.75□□□□□ -1.33
SUMO3P55854 PPIAP30-201ENST00000415473 519 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC6.75□□□□□ -1.33
SUMO3P55854 AC127537.1-201ENST00000418183 748 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC6.75□□□□□ -1.33
SUMO3P55854 RPL34P27-201ENST00000428810 349 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 UBE2V1P6-201ENST00000430840 422 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 OR52U1P-201ENST00000439752 923 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.75□□□□□ -1.33
SUMO3P55854 GTF2F2P2-201ENST00000445825 721 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC6.75□□□□□ -1.33
SUMO3P55854 RPL7P14-201ENST00000449851 741 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 AL591379.2-201ENST00000450223 397 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.75□□□□□ -1.33
SUMO3P55854 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SUMO3P55854 MTND2P30-201ENST00000456663 382 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 EIF4E2P2-201ENST00000492033 736 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 RPL12P7-201ENST00000493832 494 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms