Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC8.41□□□□□ -1.06
HLA-DOAP06340 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
HLA-DOAP06340 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.41□□□□□ -1.06
HLA-DOAP06340 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC8.41□□□□□ -1.06
HLA-DOAP06340 AC079178.2-201ENST00000439323 1624 ntBASIC8.41□□□□□ -1.06
HLA-DOAP06340 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
HLA-DOAP06340 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
HLA-DOAP06340 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC8.41□□□□□ -1.06
HLA-DOAP06340 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
HLA-DOAP06340 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
HLA-DOAP06340 RN7SKP184-201ENST00000362348 333 ntBASIC8.41□□□□□ -1.06
HLA-DOAP06340 RN7SKP107-201ENST00000364157 290 ntBASIC8.41□□□□□ -1.06
HLA-DOAP06340 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC8.41□□□□□ -1.06
HLA-DOAP06340 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
HLA-DOAP06340 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
HLA-DOAP06340 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC8.41□□□□□ -1.06
HLA-DOAP06340 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC8.41□□□□□ -1.06
HLA-DOAP06340 CHCHD3P1-201ENST00000425516 676 ntBASIC8.41□□□□□ -1.06
HLA-DOAP06340 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC8.41□□□□□ -1.06
HLA-DOAP06340 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8.41□□□□□ -1.06
HLA-DOAP06340 AC114755.4-201ENST00000439114 443 ntBASIC8.41□□□□□ -1.06
HLA-DOAP06340 CEACAMP11-201ENST00000455211 583 ntBASIC8.41□□□□□ -1.06
HLA-DOAP06340 RN7SL492P-201ENST00000460700 295 ntBASIC8.41□□□□□ -1.06
HLA-DOAP06340 RN7SL372P-201ENST00000461982 298 ntBASIC8.41□□□□□ -1.06
HLA-DOAP06340 RN7SL790P-201ENST00000474043 298 ntBASIC8.41□□□□□ -1.06
HLA-DOAP06340 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC8.41□□□□□ -1.06
HLA-DOAP06340 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC8.41□□□□□ -1.06
HLA-DOAP06340 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC8.41□□□□□ -1.06
HLA-DOAP06340 RN7SKP11-201ENST00000517018 287 ntBASIC8.41□□□□□ -1.06
HLA-DOAP06340 AC120036.3-201ENST00000517826 292 ntBASIC8.41□□□□□ -1.06
HLA-DOAP06340 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC8.41□□□□□ -1.06
HLA-DOAP06340 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
HLA-DOAP06340 AC048341.3-201ENST00000619323 491 ntBASIC8.41□□□□□ -1.06
HLA-DOAP06340 TMEM14EP-202ENST00000639378 1296 ntBASIC8.41□□□□□ -1.06
HLA-DOAP06340 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC8.41□□□□□ -1.06
HLA-DOAP06340 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HLA-DOAP06340 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HLA-DOAP06340 BTK-202ENST00000372880 2248 ntTSL 2 BASIC8.41□□□□□ -1.06
HLA-DOAP06340 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
HLA-DOAP06340 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
HLA-DOAP06340 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
HLA-DOAP06340 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
HLA-DOAP06340 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC8.4□□□□□ -1.06
HLA-DOAP06340 AC009163.7-201ENST00000621929 2557 ntBASIC8.4□□□□□ -1.06
HLA-DOAP06340 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
HLA-DOAP06340 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
HLA-DOAP06340 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
HLA-DOAP06340 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
HLA-DOAP06340 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC8.4□□□□□ -1.06
HLA-DOAP06340 RPL5P8-201ENST00000396820 815 ntBASIC8.4□□□□□ -1.06
HLA-DOAP06340 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC8.4□□□□□ -1.06
HLA-DOAP06340 NUCKS1P1-201ENST00000452067 703 ntBASIC8.4□□□□□ -1.06
HLA-DOAP06340 SEPT14P1-201ENST00000458703 648 ntBASIC8.4□□□□□ -1.06
HLA-DOAP06340 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
HLA-DOAP06340 AP005202.1-201ENST00000489915 867 ntBASIC8.4□□□□□ -1.06
HLA-DOAP06340 BLNK-209ENST00000495266 440 ntTSL 5 BASIC8.4□□□□□ -1.06
HLA-DOAP06340 CASC11-203ENST00000519071 791 ntTSL 3 BASIC8.4□□□□□ -1.06
HLA-DOAP06340 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC8.4□□□□□ -1.06
HLA-DOAP06340 CHEK2P2-201ENST00000554701 672 ntBASIC8.4□□□□□ -1.06
HLA-DOAP06340 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC8.4□□□□□ -1.06
HLA-DOAP06340 MIR4312-201ENST00000579909 76 ntBASIC8.4□□□□□ -1.06
HLA-DOAP06340 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC8.4□□□□□ -1.06
HLA-DOAP06340 AC104184.1-201ENST00000607513 721 ntBASIC8.4□□□□□ -1.06
HLA-DOAP06340 AC063962.1-201ENST00000608199 521 ntBASIC8.4□□□□□ -1.06
HLA-DOAP06340 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC8.4□□□□□ -1.06
HLA-DOAP06340 AC026367.2-201ENST00000610630 553 ntBASIC8.4□□□□□ -1.06
HLA-DOAP06340 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC8.4□□□□□ -1.06
HLA-DOAP06340 AC127071.1-201ENST00000624997 712 ntBASIC8.4□□□□□ -1.06
HLA-DOAP06340 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC8.4□□□□□ -1.06
HLA-DOAP06340 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
HLA-DOAP06340 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
HLA-DOAP06340 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
HLA-DOAP06340 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HLA-DOAP06340 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HLA-DOAP06340 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC8.39□□□□□ -1.07
HLA-DOAP06340 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.39□□□□□ -1.07
HLA-DOAP06340 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC8.39□□□□□ -1.07
HLA-DOAP06340 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.39□□□□□ -1.07
HLA-DOAP06340 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HLA-DOAP06340 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HLA-DOAP06340 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HLA-DOAP06340 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
HLA-DOAP06340 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HLA-DOAP06340 RNU6-1017P-201ENST00000363613 106 ntBASIC8.39□□□□□ -1.07
HLA-DOAP06340 MIR551B-201ENST00000384984 96 ntBASIC8.39□□□□□ -1.07
HLA-DOAP06340 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
HLA-DOAP06340 LDHAP5-201ENST00000394996 622 ntBASIC8.39□□□□□ -1.07
HLA-DOAP06340 AL034417.1-201ENST00000399343 800 ntBASIC8.39□□□□□ -1.07
HLA-DOAP06340 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC8.39□□□□□ -1.07
HLA-DOAP06340 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HLA-DOAP06340 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC8.39□□□□□ -1.07
HLA-DOAP06340 AL589794.1-201ENST00000424971 390 ntBASIC8.39□□□□□ -1.07
HLA-DOAP06340 AC007365.2-201ENST00000428806 458 ntBASIC8.39□□□□□ -1.07
HLA-DOAP06340 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC8.39□□□□□ -1.07
HLA-DOAP06340 RPL3P11-201ENST00000434028 1146 ntBASIC8.39□□□□□ -1.07
HLA-DOAP06340 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HLA-DOAP06340 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC8.39□□□□□ -1.07
HLA-DOAP06340 RN7SL655P-201ENST00000486087 298 ntBASIC8.39□□□□□ -1.07
HLA-DOAP06340 RN7SL350P-201ENST00000492591 299 ntBASIC8.39□□□□□ -1.07
HLA-DOAP06340 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms