Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 AC078880.4-201ENST00000617627 1749 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.59□□□□□ -1.52
RBFOX3A6NFN3 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.59□□□□□ -1.52
RBFOX3A6NFN3 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RBFOX3A6NFN3 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC5.59□□□□□ -1.52
RBFOX3A6NFN3 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 SF3A3P1-201ENST00000446317 1477 ntBASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AC068769.1-201ENST00000474767 2426 ntBASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 IMMTP1-201ENST00000435590 2219 ntBASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 FO393411.1-201ENST00000325612 420 ntBASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 PID1-201ENST00000354069 839 ntTSL 3 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 GCG-201ENST00000375497 799 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AC114760.1-201ENST00000420310 652 ntBASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AP001342.1-201ENST00000423389 525 ntBASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 CYP4F26P-202ENST00000433357 852 ntTSL 5 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 SNRPCP8-201ENST00000514820 211 ntBASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 ERLIN2-210ENST00000523107 771 ntTSL 3 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AP003080.1-202ENST00000526526 915 ntBASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AP005597.3-201ENST00000532369 799 ntBASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 OR4A6P-201ENST00000534364 970 ntBASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AC078886.1-201ENST00000549144 554 ntBASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AC021382.2-201ENST00000584547 922 ntTSL 3 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AC004918.3-201ENST00000602609 925 ntBASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AC111186.1-201ENST00000604684 130 ntBASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AL590560.2-201ENST00000608430 732 ntBASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 PCA3_2.1-201ENST00000612507 409 ntBASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 Metazoa_SRP.120-201ENST00000614195 252 ntBASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AL031772.1-216ENST00000619494 697 ntTSL 5 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AC021422.1-201ENST00000621212 473 ntBASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AC241585.4-201ENST00000640951 686 ntBASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AC011504.1-201ENST00000623331 4103 ntBASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 CEP57L1-202ENST00000368968 1649 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 CCDC150P1-201ENST00000537123 2215 ntBASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RBFOX3A6NFN3 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 ZNF402P-201ENST00000404435 3100 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AP000705.2-201ENST00000433524 1386 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AL078621.1-201ENST00000272567 768 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AP003170.5-201ENST00000397185 335 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AC234778.1-201ENST00000399253 370 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AL354761.1-201ENST00000434190 526 ntBASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 AL117338.1-201ENST00000434552 631 ntTSL 5 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC5.57□□□□□ -1.52
RBFOX3A6NFN3 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms