Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 RPL5P5-201ENST00000392009 893 ntBASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 RPL5P34-201ENST00000426545 891 ntBASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 AC245047.1-201ENST00000433276 873 ntBASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 RPL5P9-201ENST00000448118 886 ntBASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 AC097263.1-201ENST00000496795 606 ntBASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 AC010409.2-201ENST00000505780 478 ntBASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 MTND2P7-201ENST00000521337 640 ntBASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 MELK-208ENST00000536987 2125 ntTSL 2 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 RN7SL689P-201ENST00000577215 297 ntBASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 TRIM60P14-201ENST00000513444 1419 ntBASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 NBPF8-201ENST00000583271 5330 ntBASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 AL606490.2-201ENST00000457562 1330 ntBASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 AL117378.2-201ENST00000622916 1337 ntBASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC8.76□□□□□ -1.01
CHMP4CQ96CF2 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 EEF1A1P5-201ENST00000436459 1389 ntBASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 AL096816.1-201ENST00000623300 2920 ntBASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 AC097634.1-201ENST00000604491 2467 ntBASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 AC007923.2-201ENST00000584218 1591 ntBASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 RN7SKP77-201ENST00000363261 353 ntBASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 RNA5SP260-201ENST00000363849 111 ntBASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 AC068138.1-201ENST00000412635 217 ntBASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 RPL14P5-201ENST00000436474 730 ntBASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 FUNDC2P2-202ENST00000443452 493 ntBASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 AC106760.2-201ENST00000504159 619 ntBASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 IGKV1D-32-201ENST00000517449 318 ntBASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 AP006587.6-201ENST00000582128 1091 ntBASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 EXOSC3P2-201ENST00000594464 497 ntBASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 AC097381.3-201ENST00000608962 462 ntBASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 CASC19-212ENST00000641153 1287 ntBASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 AL391262.1-201ENST00000556558 1992 ntBASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC8.75□□□□□ -1.01
CHMP4CQ96CF2 MELK-211ENST00000545008 2236 ntTSL 2 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 AL357556.1-201ENST00000421884 1388 ntBASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms