Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 CYP39A1-201ENST00000275016 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 PHF6-203ENST00000370800 1150 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 RNU1-11P-201ENST00000383975 164 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 SNORA51.7-201ENST00000384171 134 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 RNA5SP185-201ENST00000390963 114 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 KRTAP3-3-201ENST00000391586 704 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 RPL12P10-201ENST00000413498 498 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 RPL30P16-201ENST00000419341 429 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 GRPEL2P2-201ENST00000421856 670 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 DDX11L10-201ENST00000430178 571 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 TAAR9-201ENST00000434551 1047 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AL512882.1-201ENST00000436086 832 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AL136454.1-201ENST00000443181 466 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AL157884.3-201ENST00000448273 1184 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 RPL34P22-201ENST00000468193 318 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC078857.1-201ENST00000469870 667 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC104685.1-201ENST00000502445 371 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 MTCO2P9-201ENST00000503214 694 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 HNRNPA1P44-201ENST00000503999 879 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC010486.2-201ENST00000505572 483 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC021193.1-201ENST00000511607 420 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 IGHVIII-67-3-201ENST00000517650 232 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC012414.2-201ENST00000559474 187 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 FRG2IP-201ENST00000563581 781 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC011492.1-201ENST00000600023 315 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC113368.1-201ENST00000603736 382 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC135178.6-201ENST00000605314 398 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AP001596.2-201ENST00000608410 312 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 7SK.12-201ENST00000612820 244 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC009032.1-201ENST00000617574 431 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 BX005040.2-201ENST00000620504 370 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC019226.1-201ENST00000625666 515 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 HM13-224ENST00000498035 3932 ntTSL 2 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AC145138.1-201ENST00000512908 2851 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 RN7SKP149-201ENST00000363008 344 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 RNU6-623P-201ENST00000363143 105 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 RNA5SP448-201ENST00000363151 111 ntBASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 ISY1-202ENST00000393292 988 ntTSL 5 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC8.16□□□□□ -1.1
SHKBP1Q8TBC3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms