Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SNORA70.23-201ENST00000517218 151 ntBASIC4.96□□□□□ -1.62
RPL39P62891 AC008677.3-201ENST00000519146 666 ntBASIC4.96□□□□□ -1.62
RPL39P62891 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC4.96□□□□□ -1.62
RPL39P62891 AC064807.3-201ENST00000523810 470 ntTSL 2 BASIC4.96□□□□□ -1.62
RPL39P62891 AP000873.4-201ENST00000528133 905 ntTSL 3 BASIC4.96□□□□□ -1.62
RPL39P62891 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC4.96□□□□□ -1.62
RPL39P62891 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC4.96□□□□□ -1.62
RPL39P62891 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
RPL39P62891 CRADD-210ENST00000552033 622 ntTSL 3 BASIC4.96□□□□□ -1.62
RPL39P62891 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC4.96□□□□□ -1.62
RPL39P62891 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RPL39P62891 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC4.96□□□□□ -1.62
RPL39P62891 AC243312.1-201ENST00000570582 275 ntBASIC4.96□□□□□ -1.62
RPL39P62891 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC4.96□□□□□ -1.62
RPL39P62891 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC4.96□□□□□ -1.62
RPL39P62891 APOC2-204ENST00000591597 447 ntTSL 5 BASIC4.96□□□□□ -1.62
RPL39P62891 AC097376.1-201ENST00000602907 997 ntBASIC4.96□□□□□ -1.62
RPL39P62891 AC018737.1-201ENST00000603900 204 ntBASIC4.96□□□□□ -1.62
RPL39P62891 AL109918.2-201ENST00000605188 279 ntBASIC4.96□□□□□ -1.62
RPL39P62891 AC063962.1-201ENST00000608199 521 ntBASIC4.96□□□□□ -1.62
RPL39P62891 Metazoa_SRP.180-201ENST00000612546 322 ntBASIC4.96□□□□□ -1.62
RPL39P62891 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC4.96□□□□□ -1.62
RPL39P62891 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC4.96□□□□□ -1.62
RPL39P62891 MIR6761-201ENST00000617899 72 ntBASIC4.96□□□□□ -1.62
RPL39P62891 EIF5P2-201ENST00000618904 1035 ntBASIC4.96□□□□□ -1.62
RPL39P62891 AC131009.3-201ENST00000621809 287 ntBASIC4.96□□□□□ -1.62
RPL39P62891 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC4.96□□□□□ -1.62
RPL39P62891 HLA-B-257ENST00000640094 147 ntBASIC4.96□□□□□ -1.62
RPL39P62891 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RPL39P62891 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RPL39P62891 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RPL39P62891 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RPL39P62891 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC4.96□□□□□ -1.62
RPL39P62891 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RPL39P62891 TNPO1P2-201ENST00000426249 2665 ntBASIC4.96□□□□□ -1.62
RPL39P62891 AC083806.2-201ENST00000617795 2685 ntBASIC4.96□□□□□ -1.62
RPL39P62891 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC4.96□□□□□ -1.62
RPL39P62891 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RPL39P62891 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC4.96□□□□□ -1.62
RPL39P62891 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC4.96□□□□□ -1.62
RPL39P62891 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RPL39P62891 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC4.96□□□□□ -1.62
RPL39P62891 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC4.96□□□□□ -1.62
RPL39P62891 AC119674.1-204ENST00000641348 1343 ntBASIC4.96□□□□□ -1.62
RPL39P62891 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC4.96□□□□□ -1.62
RPL39P62891 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
RPL39P62891 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC4.95□□□□□ -1.62
RPL39P62891 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC4.95□□□□□ -1.62
RPL39P62891 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC4.95□□□□□ -1.62
RPL39P62891 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 AC011592.1-201ENST00000624647 3634 ntBASIC4.95□□□□□ -1.62
RPL39P62891 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 SLC25A51-201ENST00000242275 1130 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
RPL39P62891 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RPL39P62891 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC4.95□□□□□ -1.62
RPL39P62891 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 CTSLP8-201ENST00000413075 967 ntBASIC4.95□□□□□ -1.62
RPL39P62891 RPL19P21-201ENST00000424919 591 ntBASIC4.95□□□□□ -1.62
RPL39P62891 EIF3IP1-201ENST00000433048 967 ntBASIC4.95□□□□□ -1.62
RPL39P62891 ZNF195-208ENST00000438262 1018 ntTSL 3 BASIC4.95□□□□□ -1.62
RPL39P62891 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC4.95□□□□□ -1.62
RPL39P62891 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC4.95□□□□□ -1.62
RPL39P62891 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC4.95□□□□□ -1.62
RPL39P62891 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC4.95□□□□□ -1.62
RPL39P62891 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC4.95□□□□□ -1.62
RPL39P62891 SEC22A-210ENST00000492595 972 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 FTH1P8-201ENST00000498161 514 ntBASIC4.95□□□□□ -1.62
RPL39P62891 RPS23-208ENST00000512493 443 ntTSL 3 BASIC4.95□□□□□ -1.62
RPL39P62891 AC111000.1-201ENST00000514545 713 ntBASIC4.95□□□□□ -1.62
RPL39P62891 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC4.95□□□□□ -1.62
RPL39P62891 IGHVIII-26-1-201ENST00000520387 250 ntBASIC4.95□□□□□ -1.62
RPL39P62891 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC4.95□□□□□ -1.62
RPL39P62891 AC087241.3-201ENST00000542076 862 ntTSL 2 BASIC4.95□□□□□ -1.62
RPL39P62891 AC144548.1-201ENST00000549577 324 ntBASIC4.95□□□□□ -1.62
RPL39P62891 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC4.95□□□□□ -1.62
RPL39P62891 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC4.95□□□□□ -1.62
RPL39P62891 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC4.95□□□□□ -1.62
RPL39P62891 SNORA70D-201ENST00000578836 135 ntBASIC4.95□□□□□ -1.62
RPL39P62891 RN7SL835P-201ENST00000579920 262 ntBASIC4.95□□□□□ -1.62
RPL39P62891 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC4.95□□□□□ -1.62
RPL39P62891 AC067852.5-201ENST00000589299 310 ntBASIC4.95□□□□□ -1.62
RPL39P62891 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC4.95□□□□□ -1.62
RPL39P62891 AC010530.1-201ENST00000602844 569 ntTSL 4 BASIC4.95□□□□□ -1.62
RPL39P62891 AL390058.1-201ENST00000603834 629 ntBASIC4.95□□□□□ -1.62
RPL39P62891 AC111186.1-201ENST00000604684 130 ntBASIC4.95□□□□□ -1.62
RPL39P62891 AC114810.1-201ENST00000607415 473 ntBASIC4.95□□□□□ -1.62
RPL39P62891 RN7SL3-201ENST00000610674 299 ntBASIC4.95□□□□□ -1.62
RPL39P62891 AC108704.1-201ENST00000611714 744 ntBASIC4.95□□□□□ -1.62
RPL39P62891 AC243830.2-201ENST00000618067 630 ntBASIC4.95□□□□□ -1.62
RPL39P62891 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC4.95□□□□□ -1.62
RPL39P62891 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
RPL39P62891 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms