Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RHBDL3P58872 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RHBDL3P58872 CCL7-202ENST00000394627 696 ntTSL 3 BASIC8.51□□□□□ -1.05
RHBDL3P58872 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC8.51□□□□□ -1.05
RHBDL3P58872 RN7SKP254-201ENST00000410685 310 ntBASIC8.51□□□□□ -1.05
RHBDL3P58872 AC091492.1-201ENST00000419844 272 ntBASIC8.51□□□□□ -1.05
RHBDL3P58872 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC8.51□□□□□ -1.05
RHBDL3P58872 FBP2P1-202ENST00000424473 530 ntBASIC8.51□□□□□ -1.05
RHBDL3P58872 PUDPP2-201ENST00000431423 643 ntBASIC8.51□□□□□ -1.05
RHBDL3P58872 AL354893.1-201ENST00000433735 348 ntBASIC8.51□□□□□ -1.05
RHBDL3P58872 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC8.51□□□□□ -1.05
RHBDL3P58872 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC8.51□□□□□ -1.05
RHBDL3P58872 PSPC1P2-201ENST00000455130 225 ntBASIC8.51□□□□□ -1.05
RHBDL3P58872 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC8.51□□□□□ -1.05
RHBDL3P58872 RN7SL836P-201ENST00000476140 296 ntBASIC8.51□□□□□ -1.05
RHBDL3P58872 RPL9P15-201ENST00000491096 532 ntBASIC8.51□□□□□ -1.05
RHBDL3P58872 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC8.51□□□□□ -1.05
RHBDL3P58872 LDHAP1-201ENST00000509421 992 ntBASIC8.51□□□□□ -1.05
RHBDL3P58872 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC8.51□□□□□ -1.05
RHBDL3P58872 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC8.51□□□□□ -1.05
RHBDL3P58872 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC8.51□□□□□ -1.05
RHBDL3P58872 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RHBDL3P58872 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC8.51□□□□□ -1.05
RHBDL3P58872 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC8.51□□□□□ -1.05
RHBDL3P58872 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
RHBDL3P58872 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC8.51□□□□□ -1.05
RHBDL3P58872 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC8.51□□□□□ -1.05
RHBDL3P58872 AC005479.3-201ENST00000602790 431 ntBASIC8.51□□□□□ -1.05
RHBDL3P58872 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC8.51□□□□□ -1.05
RHBDL3P58872 AL390882.1-201ENST00000618821 594 ntBASIC8.51□□□□□ -1.05
RHBDL3P58872 MIR6813-201ENST00000621638 56 ntBASIC8.51□□□□□ -1.05
RHBDL3P58872 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC8.51□□□□□ -1.05
RHBDL3P58872 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
RHBDL3P58872 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RHBDL3P58872 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RHBDL3P58872 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC8.51□□□□□ -1.05
RHBDL3P58872 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RHBDL3P58872 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.51□□□□□ -1.05
RHBDL3P58872 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC8.51□□□□□ -1.05
RHBDL3P58872 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
RHBDL3P58872 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.5□□□□□ -1.05
RHBDL3P58872 MTHFD1P1-201ENST00000413059 2764 ntBASIC8.5□□□□□ -1.05
RHBDL3P58872 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RHBDL3P58872 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC8.5□□□□□ -1.05
RHBDL3P58872 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RHBDL3P58872 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RHBDL3P58872 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC8.5□□□□□ -1.05
RHBDL3P58872 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RHBDL3P58872 TRIM51HP-202ENST00000530412 1823 ntBASIC8.5□□□□□ -1.05
RHBDL3P58872 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RHBDL3P58872 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RHBDL3P58872 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RHBDL3P58872 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RHBDL3P58872 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RHBDL3P58872 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RHBDL3P58872 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RHBDL3P58872 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
RHBDL3P58872 FAM204BP-201ENST00000369171 701 ntBASIC8.5□□□□□ -1.05
RHBDL3P58872 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
RHBDL3P58872 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC8.5□□□□□ -1.05
RHBDL3P58872 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
RHBDL3P58872 AC013403.1-201ENST00000436954 263 ntBASIC8.5□□□□□ -1.05
RHBDL3P58872 OR51P1P-201ENST00000447547 942 ntBASIC8.5□□□□□ -1.05
RHBDL3P58872 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC8.5□□□□□ -1.05
RHBDL3P58872 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
RHBDL3P58872 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC8.5□□□□□ -1.05
RHBDL3P58872 MRPL57P6-201ENST00000506570 309 ntBASIC8.5□□□□□ -1.05
RHBDL3P58872 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC8.5□□□□□ -1.05
RHBDL3P58872 AC113191.1-201ENST00000517759 403 ntBASIC8.5□□□□□ -1.05
RHBDL3P58872 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC8.5□□□□□ -1.05
RHBDL3P58872 AC089984.3-201ENST00000552838 363 ntBASIC8.5□□□□□ -1.05
RHBDL3P58872 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC8.5□□□□□ -1.05
RHBDL3P58872 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC8.5□□□□□ -1.05
RHBDL3P58872 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC8.5□□□□□ -1.05
RHBDL3P58872 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RHBDL3P58872 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC8.5□□□□□ -1.05
RHBDL3P58872 NQO2-209ENST00000606474 470 ntTSL 3 BASIC8.5□□□□□ -1.05
RHBDL3P58872 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC8.5□□□□□ -1.05
RHBDL3P58872 MIR6849-201ENST00000618543 69 ntBASIC8.5□□□□□ -1.05
RHBDL3P58872 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC8.5□□□□□ -1.05
RHBDL3P58872 AC073263.3-201ENST00000624449 858 ntBASIC8.5□□□□□ -1.05
RHBDL3P58872 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC8.5□□□□□ -1.05
RHBDL3P58872 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RHBDL3P58872 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC8.5□□□□□ -1.05
RHBDL3P58872 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RHBDL3P58872 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC8.5□□□□□ -1.05
RHBDL3P58872 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC8.5□□□□□ -1.05
RHBDL3P58872 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC8.5□□□□□ -1.05
RHBDL3P58872 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RHBDL3P58872 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
RHBDL3P58872 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RHBDL3P58872 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC8.49□□□□□ -1.05
RHBDL3P58872 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RHBDL3P58872 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
RHBDL3P58872 OR7E25P-202ENST00000641088 5937 ntBASIC8.49□□□□□ -1.05
RHBDL3P58872 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC8.49□□□□□ -1.05
RHBDL3P58872 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC8.49□□□□□ -1.05
RHBDL3P58872 AL049634.1-201ENST00000453770 1720 ntBASIC8.49□□□□□ -1.05
RHBDL3P58872 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RHBDL3P58872 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms