Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AP006587.6-201ENST00000582128 1091 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 AC107993.1-201ENST00000591343 684 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC8.95□□□□□ -0.98
ERCC3P19447 RPS28P1-201ENST00000604589 187 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC8.95□□□□□ -0.98
ERCC3P19447 IGKV1OR1-1-201ENST00000613775 347 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 AC025016.1-201ENST00000616746 682 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 AL157359.3-201ENST00000623771 217 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
ERCC3P19447 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ERCC3P19447 TDRD12-201ENST00000421545 1317 ntTSL 5 BASIC8.95□□□□□ -0.98
ERCC3P19447 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ERCC3P19447 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ERCC3P19447 MAPK10-281ENST00000641170 3070 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC8.95□□□□□ -0.98
ERCC3P19447 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ERCC3P19447 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ERCC3P19447 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ERCC3P19447 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.98
ERCC3P19447 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
ERCC3P19447 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
ERCC3P19447 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ERCC3P19447 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ERCC3P19447 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ERCC3P19447 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ERCC3P19447 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ERCC3P19447 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC8.94□□□□□ -0.98
ERCC3P19447 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ERCC3P19447 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ERCC3P19447 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC8.94□□□□□ -0.98
ERCC3P19447 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
ERCC3P19447 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
ERCC3P19447 APP-209ENST00000440126 2846 ntTSL 2 BASIC8.94□□□□□ -0.98
ERCC3P19447 RNU6-792P-201ENST00000363490 107 ntBASIC8.94□□□□□ -0.98
ERCC3P19447 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC8.94□□□□□ -0.98
ERCC3P19447 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC8.94□□□□□ -0.98
ERCC3P19447 VDAC2P3-201ENST00000430995 828 ntBASIC8.94□□□□□ -0.98
ERCC3P19447 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC8.94□□□□□ -0.98
ERCC3P19447 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ERCC3P19447 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC8.94□□□□□ -0.98
ERCC3P19447 AL158214.1-201ENST00000444423 404 ntBASIC8.94□□□□□ -0.98
ERCC3P19447 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ERCC3P19447 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ERCC3P19447 FTH1P7-201ENST00000450676 552 ntBASIC8.94□□□□□ -0.98
ERCC3P19447 AC098826.2-201ENST00000452011 651 ntBASIC8.94□□□□□ -0.98
ERCC3P19447 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC8.94□□□□□ -0.98
ERCC3P19447 AC015864.1-201ENST00000496512 544 ntBASIC8.94□□□□□ -0.98
ERCC3P19447 AC073648.3-201ENST00000504939 925 ntBASIC8.94□□□□□ -0.98
ERCC3P19447 AC100823.2-201ENST00000518337 699 ntBASIC8.94□□□□□ -0.98
ERCC3P19447 AC021001.1-201ENST00000518703 987 ntBASIC8.94□□□□□ -0.98
ERCC3P19447 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC8.94□□□□□ -0.98
ERCC3P19447 SLC25A51P2-201ENST00000535708 889 ntBASIC8.94□□□□□ -0.98
ERCC3P19447 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC8.94□□□□□ -0.98
ERCC3P19447 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC8.94□□□□□ -0.98
ERCC3P19447 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC8.94□□□□□ -0.98
ERCC3P19447 AC013652.1-206ENST00000558277 789 ntTSL 2 BASIC8.94□□□□□ -0.98
ERCC3P19447 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC8.94□□□□□ -0.98
ERCC3P19447 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC8.94□□□□□ -0.98
ERCC3P19447 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC8.94□□□□□ -0.98
ERCC3P19447 RN7SL473P-201ENST00000580341 299 ntBASIC8.94□□□□□ -0.98
ERCC3P19447 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC8.94□□□□□ -0.98
ERCC3P19447 FAM27E3-202ENST00000614611 340 ntBASIC8.94□□□□□ -0.98
ERCC3P19447 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC8.94□□□□□ -0.98
ERCC3P19447 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC8.94□□□□□ -0.98
ERCC3P19447 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC8.94□□□□□ -0.98
ERCC3P19447 AC097655.1-201ENST00000635075 318 ntBASIC8.94□□□□□ -0.98
ERCC3P19447 AC010653.3-201ENST00000635332 232 ntBASIC8.94□□□□□ -0.98
ERCC3P19447 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC8.94□□□□□ -0.98
ERCC3P19447 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
ERCC3P19447 KYNUP2-201ENST00000582280 1329 ntBASIC8.94□□□□□ -0.98
ERCC3P19447 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
ERCC3P19447 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ERCC3P19447 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC8.94□□□□□ -0.98
ERCC3P19447 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ERCC3P19447 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.94□□□□□ -0.98
ERCC3P19447 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ERCC3P19447 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
ERCC3P19447 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ERCC3P19447 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
ERCC3P19447 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC8.93□□□□□ -0.98
ERCC3P19447 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ERCC3P19447 AC139426.3-201ENST00000605648 2059 ntBASIC8.93□□□□□ -0.98
ERCC3P19447 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ERCC3P19447 FOLH1B-202ENST00000529567 2145 ntBASIC8.93□□□□□ -0.98
ERCC3P19447 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ERCC3P19447 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ERCC3P19447 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
ERCC3P19447 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ERCC3P19447 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ERCC3P19447 TDGF1P3-202ENST00000602699 2710 ntBASIC8.93□□□□□ -0.98
ERCC3P19447 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ERCC3P19447 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
ERCC3P19447 AL117344.1-201ENST00000407196 616 ntBASIC8.93□□□□□ -0.98
ERCC3P19447 RPSAP1-201ENST00000421328 880 ntBASIC8.93□□□□□ -0.98
ERCC3P19447 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC8.93□□□□□ -0.98
ERCC3P19447 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC8.93□□□□□ -0.98
ERCC3P19447 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ERCC3P19447 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC8.93□□□□□ -0.98
ERCC3P19447 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC8.93□□□□□ -0.98
ERCC3P19447 AL591379.2-201ENST00000450223 397 ntBASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms