Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 AP002370.1-201ENST00000528055 1602 ntBASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 AL035563.1-201ENST00000609087 1539 ntBASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 C1GALT1C1-202ENST00000371313 1492 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 BIN2P2-201ENST00000503900 1303 ntBASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 PSG9-203ENST00000291752 1055 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 KRTAP13-4-201ENST00000334068 797 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 TMEM244-201ENST00000368143 545 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 SNORA70.9-201ENST00000384370 135 ntBASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 TRBV5-1-201ENST00000390381 652 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 AC023669.1-201ENST00000414915 524 ntTSL 3 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 AC074033.1-201ENST00000418623 410 ntBASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 RPL22P11-201ENST00000434894 385 ntBASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 OR51R1P-201ENST00000435309 952 ntBASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 PRDX1P1-201ENST00000449329 596 ntBASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 OR5S1P-201ENST00000453063 951 ntBASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 AC084878.1-201ENST00000480555 648 ntBASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 AC009153.1-201ENST00000485799 496 ntBASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 RN7SL130P-201ENST00000489463 305 ntBASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 MED30-204ENST00000522839 476 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 AC005552.1-201ENST00000577556 662 ntBASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 AC087575.1-201ENST00000585087 229 ntBASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 AL021808.1-201ENST00000604325 1117 ntBASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 RN7SL113P-201ENST00000619959 299 ntBASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 AC129908.1-201ENST00000624553 648 ntBASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RBFOX3A6NFN3 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 AP000641.1-201ENST00000531988 1639 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 MAPK10-261ENST00000641050 3109 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 AC006511.2-201ENST00000388966 660 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 OR10U1P-201ENST00000414690 905 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 RPSAP60-201ENST00000415403 880 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 CRIP1P3-201ENST00000416794 220 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 PPIAP25-201ENST00000420177 540 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 RPSAP1-201ENST00000421328 880 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 OR10J1-201ENST00000423932 1090 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 TTC28-AS1-216ENST00000437713 854 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 AC135721.2-201ENST00000464237 300 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 ENPP7P10-201ENST00000504828 933 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 PPM1K-204ENST00000508256 923 ntTSL 2 BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 AC073648.1-201ENST00000508957 930 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 OR7E85P-201ENST00000512164 985 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 LECT2-203ENST00000512872 762 ntTSL 5 BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 ELL2P2-201ENST00000515135 694 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 AC139783.1-201ENST00000515618 681 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 HDAC2-AS2-211ENST00000520034 790 ntTSL 3 BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 SNRPCP14-201ENST00000524498 205 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 OR2AL1P-201ENST00000529862 507 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 LINC02137-201ENST00000561906 644 ntTSL 3 BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 MIR4793-201ENST00000577502 87 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 U47924.1-201ENST00000606539 434 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 CGA-202ENST00000610310 615 ntTSL 3 BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 AL352984.2-201ENST00000611153 546 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 AC243654.1-201ENST00000620218 293 ntTSL 2 BASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 AC119674.1-217ENST00000641942 1086 ntBASIC5.59□□□□□ -1.51
RBFOX3A6NFN3 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms