Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.6□□□□□ -1.19
APOEP02649 RPL5P15-201ENST00000475870 897 ntBASIC7.6□□□□□ -1.19
APOEP02649 AL928654.1-201ENST00000476081 354 ntBASIC7.6□□□□□ -1.19
APOEP02649 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7.6□□□□□ -1.19
APOEP02649 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC7.6□□□□□ -1.19
APOEP02649 HNRNPCP8-201ENST00000528764 888 ntBASIC7.6□□□□□ -1.19
APOEP02649 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.6□□□□□ -1.19
APOEP02649 DPPA3P2-201ENST00000553589 478 ntBASIC7.6□□□□□ -1.19
APOEP02649 BMS1P15-201ENST00000554269 1141 ntBASIC7.6□□□□□ -1.19
APOEP02649 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.6□□□□□ -1.19
APOEP02649 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC7.6□□□□□ -1.19
APOEP02649 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC7.6□□□□□ -1.19
APOEP02649 AP006587.6-201ENST00000582128 1091 ntBASIC7.6□□□□□ -1.19
APOEP02649 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.6□□□□□ -1.19
APOEP02649 AP001554.1-201ENST00000604533 376 ntBASIC7.6□□□□□ -1.19
APOEP02649 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.6□□□□□ -1.19
APOEP02649 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.6□□□□□ -1.19
APOEP02649 AL589993.1-201ENST00000407450 2524 ntBASIC7.6□□□□□ -1.19
APOEP02649 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
APOEP02649 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
APOEP02649 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.6□□□□□ -1.19
APOEP02649 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.6□□□□□ -1.19
APOEP02649 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.6□□□□□ -1.19
APOEP02649 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
APOEP02649 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.6□□□□□ -1.19
APOEP02649 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
APOEP02649 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
APOEP02649 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
APOEP02649 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
APOEP02649 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
APOEP02649 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
APOEP02649 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.59□□□□□ -1.19
APOEP02649 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
APOEP02649 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
APOEP02649 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.59□□□□□ -1.19
APOEP02649 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.59□□□□□ -1.19
APOEP02649 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
APOEP02649 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
APOEP02649 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC7.59□□□□□ -1.19
APOEP02649 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
APOEP02649 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
APOEP02649 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
APOEP02649 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
APOEP02649 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.59□□□□□ -1.19
APOEP02649 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC7.59□□□□□ -1.19
APOEP02649 AC079781.1-201ENST00000441505 394 ntBASIC7.59□□□□□ -1.19
APOEP02649 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC7.59□□□□□ -1.19
APOEP02649 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC7.59□□□□□ -1.19
APOEP02649 AP001994.1-201ENST00000527539 826 ntBASIC7.59□□□□□ -1.19
APOEP02649 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.59□□□□□ -1.19
APOEP02649 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
APOEP02649 AC091304.5-201ENST00000568969 158 ntBASIC7.59□□□□□ -1.19
APOEP02649 AC024614.1-201ENST00000577546 307 ntBASIC7.59□□□□□ -1.19
APOEP02649 RN7SL366P-201ENST00000577957 292 ntBASIC7.59□□□□□ -1.19
APOEP02649 AC061975.3-201ENST00000583209 244 ntBASIC7.59□□□□□ -1.19
APOEP02649 AL121583.1-201ENST00000612444 682 ntBASIC7.59□□□□□ -1.19
APOEP02649 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
APOEP02649 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.59□□□□□ -1.19
APOEP02649 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
APOEP02649 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
APOEP02649 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
APOEP02649 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
APOEP02649 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
APOEP02649 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
APOEP02649 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
APOEP02649 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
APOEP02649 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
APOEP02649 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
APOEP02649 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.58□□□□□ -1.2
APOEP02649 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC7.58□□□□□ -1.2
APOEP02649 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC7.58□□□□□ -1.2
APOEP02649 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
APOEP02649 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
APOEP02649 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.58□□□□□ -1.2
APOEP02649 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
APOEP02649 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
APOEP02649 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
APOEP02649 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
APOEP02649 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC7.58□□□□□ -1.2
APOEP02649 OR5P4P-201ENST00000424698 917 ntBASIC7.58□□□□□ -1.2
APOEP02649 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.58□□□□□ -1.2
APOEP02649 AC002486.2-201ENST00000447806 590 ntBASIC7.58□□□□□ -1.2
APOEP02649 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.58□□□□□ -1.2
APOEP02649 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.58□□□□□ -1.2
APOEP02649 OR13C1P-201ENST00000457612 963 ntBASIC7.58□□□□□ -1.2
APOEP02649 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
APOEP02649 CEACAMP3-202ENST00000483806 638 ntBASIC7.58□□□□□ -1.2
APOEP02649 AC106760.2-201ENST00000504159 619 ntBASIC7.58□□□□□ -1.2
APOEP02649 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
APOEP02649 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
APOEP02649 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.58□□□□□ -1.2
APOEP02649 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC7.58□□□□□ -1.2
APOEP02649 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
APOEP02649 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC7.58□□□□□ -1.2
APOEP02649 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC7.58□□□□□ -1.2
APOEP02649 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC7.58□□□□□ -1.2
APOEP02649 AL023806.2-201ENST00000603042 263 ntBASIC7.58□□□□□ -1.2
APOEP02649 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC7.58□□□□□ -1.2
APOEP02649 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.58□□□□□ -1.2
APOEP02649 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms