Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM2Q9C040 MIPEPP2-201ENST00000422560 1819 ntBASIC6.84□□□□□ -1.31
TRIM2Q9C040 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
TRIM2Q9C040 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM2Q9C040 AL096816.1-201ENST00000623300 2920 ntBASIC6.84□□□□□ -1.31
TRIM2Q9C040 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM2Q9C040 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
TRIM2Q9C040 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM2Q9C040 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.84□□□□□ -1.31
TRIM2Q9C040 AC009135.2-201ENST00000624136 1768 ntBASIC6.84□□□□□ -1.31
TRIM2Q9C040 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.84□□□□□ -1.31
TRIM2Q9C040 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM2Q9C040 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM2Q9C040 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.32
TRIM2Q9C040 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
TRIM2Q9C040 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM2Q9C040 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM2Q9C040 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM2Q9C040 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM2Q9C040 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM2Q9C040 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM2Q9C040 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM2Q9C040 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM2Q9C040 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM2Q9C040 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.83□□□□□ -1.32
TRIM2Q9C040 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 AC069222.1-201ENST00000608028 3360 ntBASIC6.83□□□□□ -1.32
TRIM2Q9C040 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM2Q9C040 U3.1-201ENST00000362500 215 ntBASIC6.83□□□□□ -1.32
TRIM2Q9C040 RN7SKP1-201ENST00000365525 307 ntBASIC6.83□□□□□ -1.32
TRIM2Q9C040 RNA5SP18-201ENST00000390935 121 ntBASIC6.83□□□□□ -1.32
TRIM2Q9C040 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 SNORA81-201ENST00000408493 178 ntBASIC6.83□□□□□ -1.32
TRIM2Q9C040 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 MTND2P11-201ENST00000423638 648 ntBASIC6.83□□□□□ -1.32
TRIM2Q9C040 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 PHBP4-201ENST00000437447 837 ntBASIC6.83□□□□□ -1.32
TRIM2Q9C040 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM2Q9C040 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 RPL7P17-201ENST00000470927 724 ntBASIC6.83□□□□□ -1.32
TRIM2Q9C040 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 PDPN-205ENST00000487038 607 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM2Q9C040 IGLV10-67-201ENST00000519446 325 ntBASIC6.83□□□□□ -1.32
TRIM2Q9C040 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 AC078878.1-201ENST00000539832 958 ntBASIC6.83□□□□□ -1.32
TRIM2Q9C040 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM2Q9C040 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 AC007136.1-201ENST00000589141 199 ntBASIC6.83□□□□□ -1.32
TRIM2Q9C040 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 AC022239.4-201ENST00000602626 504 ntBASIC6.83□□□□□ -1.32
TRIM2Q9C040 U47924.1-201ENST00000606539 434 ntBASIC6.83□□□□□ -1.32
TRIM2Q9C040 OR6L2P-201ENST00000608207 925 ntBASIC6.83□□□□□ -1.32
TRIM2Q9C040 AL022238.3-201ENST00000609279 443 ntBASIC6.83□□□□□ -1.32
TRIM2Q9C040 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 MIR7162-201ENST00000611134 69 ntBASIC6.83□□□□□ -1.32
TRIM2Q9C040 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM2Q9C040 SNORA43.5-201ENST00000631270 138 ntBASIC6.83□□□□□ -1.32
TRIM2Q9C040 AP000842.4-201ENST00000638781 748 ntBASIC6.83□□□□□ -1.32
TRIM2Q9C040 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM2Q9C040 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM2Q9C040 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM2Q9C040 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM2Q9C040 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM2Q9C040 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 AC011008.2-201ENST00000624866 3352 ntBASIC6.83□□□□□ -1.32
TRIM2Q9C040 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM2Q9C040 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
TRIM2Q9C040 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM2Q9C040 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.82□□□□□ -1.32
TRIM2Q9C040 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM2Q9C040 AC009166.2-201ENST00000624410 2833 ntBASIC6.82□□□□□ -1.32
TRIM2Q9C040 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
TRIM2Q9C040 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM2Q9C040 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms