Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC112243.1-201ENST00000623949 3851 ntBASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 AC110597.1-201ENST00000562669 3176 ntBASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 AL356361.1-201ENST00000400943 1459 ntBASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 RPL10P16-201ENST00000325000 645 ntBASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 RN7SKP62-201ENST00000384539 329 ntBASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 AL590762.1-201ENST00000391782 432 ntBASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 RN7SKP85-201ENST00000411349 318 ntBASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 PRPS1P2-201ENST00000430496 937 ntBASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 AC108039.2-201ENST00000440214 359 ntBASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 PRDX1P1-201ENST00000449329 596 ntBASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 RPSAP7-201ENST00000456871 885 ntBASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 RPL7P17-201ENST00000470927 724 ntBASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 RPS4XP23-201ENST00000487801 237 ntBASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 RN7SL306P-201ENST00000492941 296 ntBASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 RN7SL445P-201ENST00000495609 293 ntBASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 RN7SL143P-201ENST00000496780 297 ntBASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 AC097263.1-201ENST00000496795 606 ntBASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 AC139792.1-201ENST00000607051 647 ntBASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 SAMMSON-214ENST00000641395 1264 ntBASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 ASNSP6-201ENST00000592770 1618 ntBASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 TUBBP10-201ENST00000427668 1301 ntBASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 AC104837.1-201ENST00000444644 1587 ntBASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 RN7SKP1-201ENST00000365525 307 ntBASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 FAM204BP-201ENST00000369171 701 ntBASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 OR7E91P-201ENST00000400027 866 ntBASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 MIR1231-201ENST00000408101 92 ntBASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 AC023141.1-201ENST00000419418 379 ntBASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 AC091390.2-201ENST00000432573 374 ntBASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 AC245047.1-201ENST00000433276 873 ntBASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 RPL34P22-201ENST00000468193 318 ntBASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 RN7SL91P-201ENST00000469313 291 ntBASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 OR5M4P-201ENST00000529436 925 ntBASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 COX6CP11-201ENST00000555293 229 ntBASIC6.54□□□□□ -1.36
RSPO3Q9BXY4 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms