Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 FUNDC2P2-202ENST00000443452 493 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 RPL24P8-201ENST00000446071 474 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 AC114928.1-201ENST00000446516 415 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 RN7SL213P-201ENST00000463482 317 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 AC097263.1-201ENST00000496795 606 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 GAPDHP38-201ENST00000503632 1002 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 AC055733.3-201ENST00000505214 523 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 AC097381.3-201ENST00000608962 462 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 AC023310.4-201ENST00000613130 650 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 AC006335.3-201ENST00000613408 292 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 BX005195.1-201ENST00000618097 1198 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 WASF5P-205ENST00000428639 1455 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 OR52B5P-204ENST00000641744 3467 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 FGG-204ENST00000405164 1539 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 RBMX2P2-201ENST00000257020 946 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 RNA5SP448-201ENST00000363151 111 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 COQ3-202ENST00000369240 646 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 MIR128-2-201ENST00000384893 84 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 MIR1204-201ENST00000408388 67 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 RN7SKP225-201ENST00000410405 352 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 AC127537.1-201ENST00000418183 748 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 PRPS1P2-201ENST00000430496 937 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 ARMC8P1-201ENST00000443069 1289 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 TCEAL4P1-201ENST00000453620 588 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 AC009153.1-201ENST00000485799 496 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 OR6M3P-201ENST00000531567 700 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 RN7SL178P-201ENST00000582930 304 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 OR7E94P-202ENST00000601375 790 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 AL390058.1-201ENST00000603834 629 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 RPS28P1-201ENST00000604589 187 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 AL109936.2-201ENST00000605350 650 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 AL121583.1-201ENST00000612444 682 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 AC135050.6-202ENST00000613584 392 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 AC002094.5-201ENST00000623773 629 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 EEF1A1P5-201ENST00000436459 1389 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 MAPK10-270ENST00000641102 3538 ntBASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms