Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC009108.3-201ENST00000602739 3515 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 RN7SKP211-201ENST00000363328 315 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 Y_RNA.209-201ENST00000364156 111 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 SNORA27.3-201ENST00000364937 134 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 AL353625.1-202ENST00000366273 571 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 SNORD15A-201ENST00000384214 148 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
SUMO3P55854 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SUMO3P55854 LARP1P1-201ENST00000407692 292 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC6.81□□□□□ -1.32
SUMO3P55854 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC6.81□□□□□ -1.32
SUMO3P55854 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SUMO3P55854 HSFY1P1-201ENST00000423928 1178 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 SNX18P14-201ENST00000429308 574 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
SUMO3P55854 PIP5K1P2-201ENST00000437005 1120 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 AC005040.1-201ENST00000437783 482 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 AC108039.2-201ENST00000440214 359 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SUMO3P55854 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.81□□□□□ -1.32
SUMO3P55854 AP000547.1-201ENST00000454360 617 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.81□□□□□ -1.32
SUMO3P55854 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC6.81□□□□□ -1.32
SUMO3P55854 RN7SL180P-201ENST00000466769 294 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 RPS14P7-201ENST00000473701 448 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 RN7SL314P-201ENST00000490735 292 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC6.81□□□□□ -1.32
SUMO3P55854 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC6.81□□□□□ -1.32
SUMO3P55854 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC6.81□□□□□ -1.32
SUMO3P55854 AC025768.1-201ENST00000510057 267 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.81□□□□□ -1.32
SUMO3P55854 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC6.81□□□□□ -1.32
SUMO3P55854 AP005597.2-201ENST00000526238 341 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC6.81□□□□□ -1.32
SUMO3P55854 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.81□□□□□ -1.32
SUMO3P55854 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.81□□□□□ -1.32
SUMO3P55854 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
SUMO3P55854 ULK4P2-202ENST00000564187 492 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 AC138749.2-201ENST00000566048 167 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC6.81□□□□□ -1.32
SUMO3P55854 AC006335.3-201ENST00000613408 292 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 BX005195.1-201ENST00000618097 1198 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.81□□□□□ -1.32
SUMO3P55854 AC233280.20-201ENST00000637412 416 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 AC119674.1-209ENST00000642031 997 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 ENO1P4-201ENST00000416471 1785 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SUMO3P55854 AL391380.1-201ENST00000439300 1432 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SUMO3P55854 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC6.81□□□□□ -1.32
SUMO3P55854 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC6.81□□□□□ -1.32
SUMO3P55854 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SUMO3P55854 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SUMO3P55854 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
SUMO3P55854 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SUMO3P55854 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SUMO3P55854 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SUMO3P55854 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SUMO3P55854 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.81□□□□□ -1.32
SUMO3P55854 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SUMO3P55854 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC6.81□□□□□ -1.32
SUMO3P55854 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC6.8□□□□□ -1.32
SUMO3P55854 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SUMO3P55854 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC6.8□□□□□ -1.32
SUMO3P55854 AL137058.3-201ENST00000624531 3099 ntBASIC6.8□□□□□ -1.32
SUMO3P55854 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
SUMO3P55854 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC6.8□□□□□ -1.32
SUMO3P55854 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SUMO3P55854 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC6.8□□□□□ -1.32
SUMO3P55854 XIST-206ENST00000434839 2865 ntTSL 5 BASIC6.8□□□□□ -1.32
SUMO3P55854 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 AC087565.3-202ENST00000642085 1603 ntBASIC6.8□□□□□ -1.32
SUMO3P55854 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 RN7SKP63-201ENST00000363187 301 ntBASIC6.8□□□□□ -1.32
SUMO3P55854 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SUMO3P55854 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SUMO3P55854 RPL7-203ENST00000396466 762 ntTSL 3 BASIC6.8□□□□□ -1.32
SUMO3P55854 OR7E91P-201ENST00000400027 866 ntBASIC6.8□□□□□ -1.32
SUMO3P55854 AMZ2P2-201ENST00000406819 1057 ntBASIC6.8□□□□□ -1.32
SUMO3P55854 RN7SKP131-201ENST00000410698 301 ntBASIC6.8□□□□□ -1.32
SUMO3P55854 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.8□□□□□ -1.32
SUMO3P55854 AC109638.1-201ENST00000417406 326 ntBASIC6.8□□□□□ -1.32
SUMO3P55854 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SUMO3P55854 HSFY7P-201ENST00000432672 318 ntBASIC6.8□□□□□ -1.32
SUMO3P55854 RPL5P4-201ENST00000434805 886 ntBASIC6.8□□□□□ -1.32
SUMO3P55854 HSFY8P-201ENST00000437934 318 ntBASIC6.8□□□□□ -1.32
SUMO3P55854 SCAND3P1-201ENST00000439854 1060 ntBASIC6.8□□□□□ -1.32
SUMO3P55854 FUNDC2P2-202ENST00000443452 493 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms