Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.84□□□□□ -1.31
SCN2BO60939 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.84□□□□□ -1.31
SCN2BO60939 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
SCN2BO60939 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
SCN2BO60939 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
SCN2BO60939 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
SCN2BO60939 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.84□□□□□ -1.31
SCN2BO60939 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
SCN2BO60939 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.84□□□□□ -1.31
SCN2BO60939 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC6.84□□□□□ -1.31
SCN2BO60939 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 RNA5SP260-201ENST00000363849 111 ntBASIC6.84□□□□□ -1.31
SCN2BO60939 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC6.84□□□□□ -1.31
SCN2BO60939 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
SCN2BO60939 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC6.84□□□□□ -1.31
SCN2BO60939 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 EEF1GP7-201ENST00000422983 703 ntBASIC6.84□□□□□ -1.31
SCN2BO60939 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.84□□□□□ -1.31
SCN2BO60939 OR3B1P-201ENST00000437536 893 ntBASIC6.84□□□□□ -1.31
SCN2BO60939 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.84□□□□□ -1.31
SCN2BO60939 RN7SL251P-201ENST00000464175 297 ntBASIC6.84□□□□□ -1.31
SCN2BO60939 RN7SL338P-201ENST00000481467 293 ntBASIC6.84□□□□□ -1.31
SCN2BO60939 RN7SL705P-201ENST00000481678 294 ntBASIC6.84□□□□□ -1.31
SCN2BO60939 Z99943.2-201ENST00000507585 266 ntBASIC6.84□□□□□ -1.31
SCN2BO60939 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC6.84□□□□□ -1.31
SCN2BO60939 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC6.84□□□□□ -1.31
SCN2BO60939 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC6.84□□□□□ -1.31
SCN2BO60939 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC6.84□□□□□ -1.31
SCN2BO60939 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC6.84□□□□□ -1.31
SCN2BO60939 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.84□□□□□ -1.31
SCN2BO60939 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC6.84□□□□□ -1.31
SCN2BO60939 SNRPCP20-201ENST00000588011 210 ntBASIC6.84□□□□□ -1.31
SCN2BO60939 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.84□□□□□ -1.31
SCN2BO60939 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC6.84□□□□□ -1.31
SCN2BO60939 AC098590.2-201ENST00000614787 281 ntBASIC6.84□□□□□ -1.31
SCN2BO60939 KDM5DP1-201ENST00000622542 298 ntBASIC6.84□□□□□ -1.31
SCN2BO60939 AL353898.2-201ENST00000623000 255 ntBASIC6.84□□□□□ -1.31
SCN2BO60939 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC6.84□□□□□ -1.31
SCN2BO60939 TMEM14EP-202ENST00000639378 1296 ntBASIC6.84□□□□□ -1.31
SCN2BO60939 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.84□□□□□ -1.31
SCN2BO60939 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
SCN2BO60939 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.84□□□□□ -1.31
SCN2BO60939 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.84□□□□□ -1.31
SCN2BO60939 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.84□□□□□ -1.31
SCN2BO60939 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCN2BO60939 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
SCN2BO60939 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SCN2BO60939 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SCN2BO60939 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SCN2BO60939 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCN2BO60939 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCN2BO60939 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
SCN2BO60939 FGG-204ENST00000405164 1539 ntTSL 5 BASIC6.83□□□□□ -1.32
SCN2BO60939 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCN2BO60939 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
SCN2BO60939 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
SCN2BO60939 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC6.83□□□□□ -1.32
SCN2BO60939 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.83□□□□□ -1.32
SCN2BO60939 RPL6P2-201ENST00000425480 783 ntBASIC6.83□□□□□ -1.32
SCN2BO60939 CEACAMP5-201ENST00000448037 961 ntBASIC6.83□□□□□ -1.32
SCN2BO60939 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC6.83□□□□□ -1.32
SCN2BO60939 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.83□□□□□ -1.32
SCN2BO60939 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC6.83□□□□□ -1.32
SCN2BO60939 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC6.83□□□□□ -1.32
SCN2BO60939 LNX1-AS2-202ENST00000509974 628 ntTSL 2 BASIC6.83□□□□□ -1.32
SCN2BO60939 SUMO2P7-201ENST00000511179 285 ntBASIC6.83□□□□□ -1.32
SCN2BO60939 IGLV1-62-201ENST00000518003 441 ntBASIC6.83□□□□□ -1.32
SCN2BO60939 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
SCN2BO60939 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.83□□□□□ -1.32
SCN2BO60939 MIR3135A-201ENST00000578460 77 ntBASIC6.83□□□□□ -1.32
SCN2BO60939 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC6.83□□□□□ -1.32
SCN2BO60939 MIR3187-201ENST00000583431 70 ntBASIC6.83□□□□□ -1.32
SCN2BO60939 RN7SL25P-201ENST00000583862 260 ntBASIC6.83□□□□□ -1.32
SCN2BO60939 AC020765.1-201ENST00000604296 328 ntBASIC6.83□□□□□ -1.32
SCN2BO60939 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.83□□□□□ -1.32
SCN2BO60939 AC002094.5-201ENST00000623773 629 ntBASIC6.83□□□□□ -1.32
SCN2BO60939 AC110769.3-201ENST00000624567 1173 ntBASIC6.83□□□□□ -1.32
SCN2BO60939 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.83□□□□□ -1.32
SCN2BO60939 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SCN2BO60939 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCN2BO60939 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms