Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC78A2IDD5 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC78A2IDD5 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
CCDC78A2IDD5 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
CCDC78A2IDD5 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC78A2IDD5 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC78A2IDD5 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC78A2IDD5 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.49□□□□□ -1.21
CCDC78A2IDD5 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC78A2IDD5 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CCDC78A2IDD5 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
CCDC78A2IDD5 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC78A2IDD5 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC78A2IDD5 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC78A2IDD5 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.49□□□□□ -1.21
CCDC78A2IDD5 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC7.49□□□□□ -1.21
CCDC78A2IDD5 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC78A2IDD5 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.49□□□□□ -1.21
CCDC78A2IDD5 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AC110716.2-201ENST00000563865 3945 ntBASIC7.48□□□□□ -1.21
CCDC78A2IDD5 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 RNA5SP79-201ENST00000365193 109 ntBASIC7.48□□□□□ -1.21
CCDC78A2IDD5 COQ3-202ENST00000369240 646 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 CREM-214ENST00000395887 849 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 SNORA2C-201ENST00000408564 137 ntBASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AC231533.2-201ENST00000419045 978 ntBASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 NFYAP1-201ENST00000431953 972 ntBASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 RPL6P24-201ENST00000445338 864 ntBASIC7.48□□□□□ -1.21
CCDC78A2IDD5 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AC092905.1-201ENST00000467527 949 ntBASIC7.48□□□□□ -1.21
CCDC78A2IDD5 CREM-224ENST00000468236 582 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AC084878.1-201ENST00000480555 648 ntBASIC7.48□□□□□ -1.21
CCDC78A2IDD5 RN7SL338P-201ENST00000481467 293 ntBASIC7.48□□□□□ -1.21
CCDC78A2IDD5 CREM-234ENST00000484283 660 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AC095059.2-201ENST00000510601 933 ntBASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AL356800.1-201ENST00000553339 735 ntBASIC7.48□□□□□ -1.21
CCDC78A2IDD5 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AC020978.7-201ENST00000575953 1187 ntBASIC7.48□□□□□ -1.21
CCDC78A2IDD5 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 MIR5192-201ENST00000579892 92 ntBASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AC023389.2-201ENST00000580031 955 ntBASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AP005212.4-201ENST00000614206 710 ntBASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AC007204.1-201ENST00000621794 555 ntBASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AC005383.1-201ENST00000622689 534 ntBASIC7.48□□□□□ -1.21
CCDC78A2IDD5 C18orf12-201ENST00000623329 537 ntBASIC7.48□□□□□ -1.21
CCDC78A2IDD5 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 AP003471.1-202ENST00000319051 1988 ntBASIC7.48□□□□□ -1.21
CCDC78A2IDD5 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.48□□□□□ -1.21
CCDC78A2IDD5 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC7.47□□□□□ -1.21
CCDC78A2IDD5 AC087045.3-201ENST00000623046 2468 ntBASIC7.47□□□□□ -1.21
CCDC78A2IDD5 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC78A2IDD5 AL445250.1-203ENST00000641829 1535 ntBASIC7.47□□□□□ -1.21
CCDC78A2IDD5 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC78A2IDD5 AC006116.1-201ENST00000587908 2171 ntBASIC7.47□□□□□ -1.21
CCDC78A2IDD5 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.47□□□□□ -1.21
CCDC78A2IDD5 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.47□□□□□ -1.21
CCDC78A2IDD5 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC78A2IDD5 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC78A2IDD5 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.47□□□□□ -1.21
CCDC78A2IDD5 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC78A2IDD5 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC78A2IDD5 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC78A2IDD5 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC78A2IDD5 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC78A2IDD5 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CCDC78A2IDD5 AP000568.1-201ENST00000282964 442 ntBASIC7.47□□□□□ -1.21
CCDC78A2IDD5 SNORA68-201ENST00000384437 133 ntBASIC7.47□□□□□ -1.21
CCDC78A2IDD5 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC7.47□□□□□ -1.21
CCDC78A2IDD5 AL136455.1-201ENST00000441083 1240 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms