Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL353622.1-201ENST00000604716 1945 ntBASIC7.55□□□□□ -1.2
SLC1A1P43005 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SLC1A1P43005 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SLC1A1P43005 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
SLC1A1P43005 RN7SKP62-201ENST00000384539 329 ntBASIC7.55□□□□□ -1.2
SLC1A1P43005 IFNA12P-201ENST00000413147 571 ntBASIC7.55□□□□□ -1.2
SLC1A1P43005 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC7.55□□□□□ -1.2
SLC1A1P43005 AC009299.1-201ENST00000429684 717 ntBASIC7.55□□□□□ -1.2
SLC1A1P43005 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.55□□□□□ -1.2
SLC1A1P43005 LINC01821-202ENST00000438505 882 ntTSL 4 BASIC7.55□□□□□ -1.2
SLC1A1P43005 AC108039.2-201ENST00000440214 359 ntBASIC7.55□□□□□ -1.2
SLC1A1P43005 ARMC8P1-201ENST00000443069 1289 ntBASIC7.55□□□□□ -1.2
SLC1A1P43005 AC090954.1-201ENST00000445502 361 ntBASIC7.55□□□□□ -1.2
SLC1A1P43005 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
SLC1A1P43005 PRDX1P1-201ENST00000449329 596 ntBASIC7.55□□□□□ -1.2
SLC1A1P43005 AL034399.1-201ENST00000451535 380 ntBASIC7.55□□□□□ -1.2
SLC1A1P43005 TCEAL4P1-201ENST00000453620 588 ntBASIC7.55□□□□□ -1.2
SLC1A1P43005 PGBD4P1-201ENST00000473644 407 ntBASIC7.55□□□□□ -1.2
SLC1A1P43005 AP005202.1-201ENST00000489915 867 ntBASIC7.55□□□□□ -1.2
SLC1A1P43005 OR7E163P-201ENST00000505943 894 ntBASIC7.55□□□□□ -1.2
SLC1A1P43005 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC7.55□□□□□ -1.2
SLC1A1P43005 LINC01085-203ENST00000511195 326 ntBASIC7.55□□□□□ -1.2
SLC1A1P43005 PGAM4P2-201ENST00000512491 721 ntBASIC7.55□□□□□ -1.2
SLC1A1P43005 OR7E154P-201ENST00000525174 932 ntBASIC7.55□□□□□ -1.2
SLC1A1P43005 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC7.55□□□□□ -1.2
SLC1A1P43005 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC7.55□□□□□ -1.2
SLC1A1P43005 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC7.55□□□□□ -1.2
SLC1A1P43005 AC133569.1-201ENST00000564327 373 ntBASIC7.55□□□□□ -1.2
SLC1A1P43005 AC068802.1-201ENST00000603420 732 ntBASIC7.55□□□□□ -1.2
SLC1A1P43005 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC7.55□□□□□ -1.2
SLC1A1P43005 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.55□□□□□ -1.2
SLC1A1P43005 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
SLC1A1P43005 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.55□□□□□ -1.2
SLC1A1P43005 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
SLC1A1P43005 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SLC1A1P43005 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SLC1A1P43005 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SLC1A1P43005 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
SLC1A1P43005 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
SLC1A1P43005 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SLC1A1P43005 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SLC1A1P43005 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SLC1A1P43005 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SLC1A1P43005 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.55□□□□□ -1.2
SLC1A1P43005 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.54□□□□□ -1.2
SLC1A1P43005 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.54□□□□□ -1.2
SLC1A1P43005 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
SLC1A1P43005 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.54□□□□□ -1.2
SLC1A1P43005 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 AL358913.2-201ENST00000553881 1548 ntBASIC7.54□□□□□ -1.2
SLC1A1P43005 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
SLC1A1P43005 AC132219.2-201ENST00000624416 2327 ntBASIC7.54□□□□□ -1.2
SLC1A1P43005 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.54□□□□□ -1.2
SLC1A1P43005 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC7.54□□□□□ -1.2
SLC1A1P43005 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.54□□□□□ -1.2
SLC1A1P43005 GNAI2P2-201ENST00000417003 916 ntBASIC7.54□□□□□ -1.2
SLC1A1P43005 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC7.54□□□□□ -1.2
SLC1A1P43005 UQCRHP1-204ENST00000424609 274 ntBASIC7.54□□□□□ -1.2
SLC1A1P43005 MED15P9-201ENST00000424716 533 ntBASIC7.54□□□□□ -1.2
SLC1A1P43005 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC7.54□□□□□ -1.2
SLC1A1P43005 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC7.54□□□□□ -1.2
SLC1A1P43005 HBBP1-201ENST00000433329 439 ntBASIC7.54□□□□□ -1.2
SLC1A1P43005 HMGN1P6-201ENST00000438508 291 ntBASIC7.54□□□□□ -1.2
SLC1A1P43005 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC7.54□□□□□ -1.2
SLC1A1P43005 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC7.54□□□□□ -1.2
SLC1A1P43005 RN7SL791P-201ENST00000467868 295 ntBASIC7.54□□□□□ -1.2
SLC1A1P43005 RPS4XP23-201ENST00000487801 237 ntBASIC7.54□□□□□ -1.2
SLC1A1P43005 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.54□□□□□ -1.2
SLC1A1P43005 AC095057.1-201ENST00000507583 168 ntBASIC7.54□□□□□ -1.2
SLC1A1P43005 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC7.54□□□□□ -1.2
SLC1A1P43005 AC090539.2-201ENST00000523425 671 ntBASIC7.54□□□□□ -1.2
SLC1A1P43005 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC7.54□□□□□ -1.2
SLC1A1P43005 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC7.54□□□□□ -1.2
SLC1A1P43005 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC7.54□□□□□ -1.2
SLC1A1P43005 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC7.54□□□□□ -1.2
SLC1A1P43005 RPS7P1-201ENST00000571702 585 ntBASIC7.54□□□□□ -1.2
SLC1A1P43005 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC7.54□□□□□ -1.2
SLC1A1P43005 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC7.54□□□□□ -1.2
SLC1A1P43005 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.54□□□□□ -1.2
SLC1A1P43005 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.54□□□□□ -1.2
SLC1A1P43005 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 TMEM75-201ENST00000624314 2165 ntBASIC7.54□□□□□ -1.2
SLC1A1P43005 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.54□□□□□ -1.2
SLC1A1P43005 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SLC1A1P43005 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms