Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.67□□□□□ -1.34
SSX4O60224 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSX4O60224 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSX4O60224 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.67□□□□□ -1.34
SSX4O60224 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSX4O60224 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.67□□□□□ -1.34
SSX4O60224 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSX4O60224 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSX4O60224 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.67□□□□□ -1.34
SSX4O60224 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.67□□□□□ -1.34
SSX4O60224 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.67□□□□□ -1.34
SSX4O60224 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC6.67□□□□□ -1.34
SSX4O60224 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.67□□□□□ -1.34
SSX4O60224 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSX4O60224 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.67□□□□□ -1.34
SSX4O60224 TMEM75-201ENST00000624314 2165 ntBASIC6.67□□□□□ -1.34
SSX4O60224 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSX4O60224 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.67□□□□□ -1.34
SSX4O60224 OR56A1-201ENST00000316650 1071 ntBASIC6.67□□□□□ -1.34
SSX4O60224 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SSX4O60224 RN7SKP50-201ENST00000364694 315 ntBASIC6.67□□□□□ -1.34
SSX4O60224 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSX4O60224 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SSX4O60224 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSX4O60224 GSTA10P-201ENST00000412182 576 ntBASIC6.67□□□□□ -1.34
SSX4O60224 ST13P13-201ENST00000417082 1092 ntBASIC6.67□□□□□ -1.34
SSX4O60224 AC093107.1-201ENST00000422772 609 ntBASIC6.67□□□□□ -1.34
SSX4O60224 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC6.67□□□□□ -1.34
SSX4O60224 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC6.67□□□□□ -1.34
SSX4O60224 GAPDHP51-201ENST00000426454 1000 ntBASIC6.67□□□□□ -1.34
SSX4O60224 BMS1P12-201ENST00000428213 706 ntBASIC6.67□□□□□ -1.34
SSX4O60224 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC6.67□□□□□ -1.34
SSX4O60224 GAPDHP32-201ENST00000433816 998 ntBASIC6.67□□□□□ -1.34
SSX4O60224 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSX4O60224 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC6.67□□□□□ -1.34
SSX4O60224 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC6.67□□□□□ -1.34
SSX4O60224 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
SSX4O60224 AC025419.1-202ENST00000535315 744 ntTSL 3 BASIC6.67□□□□□ -1.34
SSX4O60224 AP000619.1-201ENST00000540293 1000 ntBASIC6.67□□□□□ -1.34
SSX4O60224 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC6.67□□□□□ -1.34
SSX4O60224 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC6.67□□□□□ -1.34
SSX4O60224 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.67□□□□□ -1.34
SSX4O60224 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC6.67□□□□□ -1.34
SSX4O60224 RN7SL697P-201ENST00000582484 299 ntBASIC6.67□□□□□ -1.34
SSX4O60224 RPS11-203ENST00000596873 583 ntTSL 2 BASIC6.67□□□□□ -1.34
SSX4O60224 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC6.67□□□□□ -1.34
SSX4O60224 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC6.67□□□□□ -1.34
SSX4O60224 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC6.67□□□□□ -1.34
SSX4O60224 OR56A1-204ENST00000641938 1071 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SSX4O60224 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSX4O60224 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC6.67□□□□□ -1.34
SSX4O60224 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SSX4O60224 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSX4O60224 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSX4O60224 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSX4O60224 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSX4O60224 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC6.67□□□□□ -1.34
SSX4O60224 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
SSX4O60224 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SSX4O60224 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSX4O60224 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.67□□□□□ -1.34
SSX4O60224 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSX4O60224 AC074198.1-201ENST00000506546 1397 ntBASIC6.67□□□□□ -1.34
SSX4O60224 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
SSX4O60224 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SSX4O60224 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC6.67□□□□□ -1.34
SSX4O60224 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSX4O60224 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SSX4O60224 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSX4O60224 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSX4O60224 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
SSX4O60224 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC6.66□□□□□ -1.34
SSX4O60224 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSX4O60224 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.66□□□□□ -1.34
SSX4O60224 AC130464.1-201ENST00000416201 1500 ntBASIC6.66□□□□□ -1.34
SSX4O60224 AC083806.2-201ENST00000617795 2685 ntBASIC6.66□□□□□ -1.34
SSX4O60224 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.66□□□□□ -1.34
SSX4O60224 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSX4O60224 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSX4O60224 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSX4O60224 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSX4O60224 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
SSX4O60224 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSX4O60224 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
SSX4O60224 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SSX4O60224 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
SSX4O60224 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSX4O60224 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSX4O60224 SNORA51.7-201ENST00000384171 134 ntBASIC6.66□□□□□ -1.34
SSX4O60224 MIR106B-201ENST00000385301 82 ntBASIC6.66□□□□□ -1.34
SSX4O60224 AL109918.1-202ENST00000406724 436 ntBASIC6.66□□□□□ -1.34
SSX4O60224 LARP1P1-201ENST00000407692 292 ntBASIC6.66□□□□□ -1.34
SSX4O60224 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC6.66□□□□□ -1.34
SSX4O60224 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC6.66□□□□□ -1.34
SSX4O60224 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.66□□□□□ -1.34
SSX4O60224 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC6.66□□□□□ -1.34
SSX4O60224 OR5P4P-201ENST00000424698 917 ntBASIC6.66□□□□□ -1.34
SSX4O60224 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC6.66□□□□□ -1.34
SSX4O60224 AC009299.1-201ENST00000429684 717 ntBASIC6.66□□□□□ -1.34
SSX4O60224 Z98752.2-201ENST00000432727 312 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms