Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 GOT2P1-201ENST00000440922 1309 ntBASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 AL138847.1-201ENST00000258651 546 ntBASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 RNA5SP427-201ENST00000365323 119 ntBASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 EEF1GP7-201ENST00000422983 703 ntBASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 OR5P4P-201ENST00000424698 917 ntBASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 AL139135.2-201ENST00000445040 433 ntBASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 RBMY3AP-201ENST00000449381 1145 ntBASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 EAF2-202ENST00000451944 960 ntTSL 2 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 RN7SL213P-201ENST00000463482 317 ntBASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 RN7SL688P-201ENST00000471754 275 ntBASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 RPL7AP56-201ENST00000476420 791 ntBASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 OR7E83P-201ENST00000511021 970 ntBASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 AC012181.2-201ENST00000570210 699 ntBASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 RN7SL366P-201ENST00000577957 292 ntBASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 OR7A1P-201ENST00000601206 970 ntBASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 AC008385.1-201ENST00000604421 355 ntBASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 RPS28P1-201ENST00000604589 187 ntBASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 AC183089.2-201ENST00000637931 916 ntBASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 AC104162.1-201ENST00000430831 2382 ntBASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 USP3-201ENST00000268049 5311 ntTSL 5 BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 SNORA73B-201ENST00000363217 204 ntBASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 RPL9P21-201ENST00000392269 505 ntBASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 CYCSP44-201ENST00000448560 313 ntBASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 PSPC1P2-201ENST00000455130 225 ntBASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 AC131233.1-201ENST00000479200 955 ntBASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 RN7SL282P-201ENST00000479676 297 ntBASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 NDUFA3P4-201ENST00000560814 250 ntBASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 UBE2CP4-201ENST00000561405 535 ntBASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 RN7SL667P-201ENST00000582817 298 ntBASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 AC106795.5-201ENST00000623288 454 ntBASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms