Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 AL731537.2-201ENST00000561565 951 ntBASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 RPS7P1-201ENST00000571702 585 ntBASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 AL049840.6-202ENST00000603373 279 ntBASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 AL139022.2-201ENST00000606934 443 ntBASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 AC097381.3-201ENST00000608962 462 ntBASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 SNORD91A-202ENST00000609620 191 ntBASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 WNK1-220ENST00000574564 1401 ntBASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 AL355862.1-201ENST00000412705 353 ntBASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 AF274573.1-201ENST00000430535 494 ntBASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 RSL24D1P8-201ENST00000434442 492 ntBASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 RPL7L1P11-201ENST00000446092 721 ntBASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 RN7SL688P-201ENST00000471754 275 ntBASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 RPL5P15-201ENST00000475870 897 ntBASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 AC106760.2-201ENST00000504159 619 ntBASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 AP006587.6-201ENST00000582128 1091 ntBASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 BNIP3P40-201ENST00000596017 556 ntBASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 RN7SL778P-201ENST00000607160 297 ntBASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 AL139123.1-201ENST00000612008 430 ntBASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 AC022079.1-201ENST00000621546 602 ntBASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP1Q96SZ6 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AL139805.2-201ENST00000455305 2433 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 HSP90AB7P-201ENST00000450068 2454 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 SAMMSON-203ENST00000641005 2168 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AC126773.4-201ENST00000612545 3043 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AL589826.1-201ENST00000340697 249 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 OR6K3-202ENST00000368146 996 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 SNORA68-201ENST00000384437 133 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 SNORA3.1-201ENST00000408166 111 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AC009413.1-201ENST00000414823 399 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 MTND4P11-201ENST00000417020 1058 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms