Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 AC095057.1-201ENST00000507583 168 ntBASIC5.43□□□□□ -1.54
AP1S3Q96PC3 AC080079.1-201ENST00000509326 1045 ntBASIC5.43□□□□□ -1.54
AP1S3Q96PC3 AC109811.2-201ENST00000509609 452 ntBASIC5.43□□□□□ -1.54
AP1S3Q96PC3 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 GAPDHP44-201ENST00000513513 1007 ntBASIC5.43□□□□□ -1.54
AP1S3Q96PC3 LINC01024-206ENST00000522747 1044 ntTSL 3 BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 AC104117.2-201ENST00000523735 515 ntBASIC5.43□□□□□ -1.54
AP1S3Q96PC3 AP003080.1-202ENST00000526526 915 ntBASIC5.43□□□□□ -1.54
AP1S3Q96PC3 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 MKNK2-211ENST00000591142 875 ntTSL 2 BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 AC010680.5-201ENST00000605021 463 ntBASIC5.43□□□□□ -1.54
AP1S3Q96PC3 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 AC016999.2-201ENST00000614692 556 ntBASIC5.43□□□□□ -1.54
AP1S3Q96PC3 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.43□□□□□ -1.54
AP1S3Q96PC3 MIR7156-201ENST00000620979 60 ntBASIC5.43□□□□□ -1.54
AP1S3Q96PC3 AL121985.2-201ENST00000621192 555 ntBASIC5.43□□□□□ -1.54
AP1S3Q96PC3 AP000851.2-201ENST00000629499 721 ntTSL 3 BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 FAM240B-202ENST00000637691 966 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 MITF-202ENST00000314589 1993 ntTSL 2 BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 AC073365.1-203ENST00000641055 1992 ntBASIC5.43□□□□□ -1.54
AP1S3Q96PC3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 PQLC2L-203ENST00000449199 1484 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 ANP32E-203ENST00000436748 1339 ntTSL 2 BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 TTTY25P-201ENST00000558356 1505 ntBASIC5.43□□□□□ -1.54
AP1S3Q96PC3 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
AP1S3Q96PC3 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 AC087392.3-202ENST00000358446 1754 ntBASIC5.42□□□□□ -1.54
AP1S3Q96PC3 AC034229.2-201ENST00000566945 2508 ntBASIC5.42□□□□□ -1.54
AP1S3Q96PC3 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 DEFB105B-201ENST00000335510 331 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 RN7SKP50-201ENST00000364694 315 ntBASIC5.42□□□□□ -1.54
AP1S3Q96PC3 TMEM244-201ENST00000368143 545 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 BEND6-201ENST00000370745 579 ntTSL 5 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 SMIM30-201ENST00000397764 1070 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 RPL5P35-201ENST00000398869 816 ntBASIC5.42□□□□□ -1.54
AP1S3Q96PC3 MAML3-201ENST00000398940 831 ntTSL 5 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 SUMO2P13-201ENST00000403109 272 ntBASIC5.42□□□□□ -1.54
AP1S3Q96PC3 RNA5SP203-201ENST00000410451 136 ntBASIC5.42□□□□□ -1.54
AP1S3Q96PC3 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 RPL23AP18-201ENST00000416139 468 ntBASIC5.42□□□□□ -1.54
AP1S3Q96PC3 AC104455.1-201ENST00000417340 736 ntBASIC5.42□□□□□ -1.54
AP1S3Q96PC3 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 RPL10P5-201ENST00000427719 639 ntBASIC5.42□□□□□ -1.54
AP1S3Q96PC3 OR51R1P-201ENST00000435309 952 ntBASIC5.42□□□□□ -1.54
AP1S3Q96PC3 PET100-201ENST00000456958 219 ntTSL 2 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 AC128716.1-201ENST00000475129 166 ntBASIC5.42□□□□□ -1.54
AP1S3Q96PC3 PAQR9-AS1-201ENST00000478823 610 ntTSL 3 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 LEF1-AS1-205ENST00000508286 444 ntTSL 2 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 AC091939.1-201ENST00000522704 691 ntTSL 3 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 AC087521.3-202ENST00000526408 743 ntTSL 5 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 AP005135.1-201ENST00000532071 714 ntTSL 3 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 HNF1A-AS1-202ENST00000535301 536 ntTSL 4 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 ANAPC15-213ENST00000543050 807 ntTSL 3 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 AC138331.1-201ENST00000549993 376 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 AC073611.1-201ENST00000550263 647 ntTSL 2 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 AL157955.2-202ENST00000553921 467 ntTSL 3 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 EIF4EBP2P2-201ENST00000563883 333 ntBASIC5.42□□□□□ -1.54
AP1S3Q96PC3 DNM1P34-202ENST00000567850 315 ntBASIC5.42□□□□□ -1.54
AP1S3Q96PC3 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 AC008751.1-201ENST00000600438 342 ntBASIC5.42□□□□□ -1.54
AP1S3Q96PC3 PFKM-232ENST00000629846 381 ntTSL 4 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 EXOC1L-202ENST00000636125 863 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 CASC19-232ENST00000641480 1244 ntBASIC5.42□□□□□ -1.54
AP1S3Q96PC3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.42□□□□□ -1.54
AP1S3Q96PC3 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms