Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RN7SL58P-201ENST00000473445 294 ntBASIC9.03□□□□□ -0.96
ERCC3P19447 RN7SL182P-201ENST00000496499 300 ntBASIC9.03□□□□□ -0.96
ERCC3P19447 AC109439.1-201ENST00000511236 715 ntBASIC9.03□□□□□ -0.96
ERCC3P19447 IGHV7-40-201ENST00000520963 296 ntBASIC9.03□□□□□ -0.96
ERCC3P19447 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC9.03□□□□□ -0.96
ERCC3P19447 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC9.03□□□□□ -0.96
ERCC3P19447 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC9.03□□□□□ -0.96
ERCC3P19447 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC9.03□□□□□ -0.96
ERCC3P19447 AP006296.1-201ENST00000537438 499 ntBASIC9.03□□□□□ -0.96
ERCC3P19447 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC9.03□□□□□ -0.96
ERCC3P19447 AL356800.1-201ENST00000553339 735 ntBASIC9.03□□□□□ -0.96
ERCC3P19447 LINC00520-206ENST00000560336 883 ntTSL 3 BASIC9.03□□□□□ -0.96
ERCC3P19447 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC9.03□□□□□ -0.96
ERCC3P19447 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC9.03□□□□□ -0.96
ERCC3P19447 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC9.03□□□□□ -0.96
ERCC3P19447 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC9.03□□□□□ -0.96
ERCC3P19447 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC9.03□□□□□ -0.96
ERCC3P19447 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC9.03□□□□□ -0.96
ERCC3P19447 AC245389.2-201ENST00000616023 576 ntBASIC9.03□□□□□ -0.96
ERCC3P19447 AC242843.1-201ENST00000618702 573 ntBASIC9.03□□□□□ -0.96
ERCC3P19447 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ERCC3P19447 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC9.03□□□□□ -0.96
ERCC3P19447 AC026336.5-201ENST00000624455 738 ntBASIC9.03□□□□□ -0.96
ERCC3P19447 AC004808.1-201ENST00000627671 721 ntBASIC9.03□□□□□ -0.96
ERCC3P19447 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC9.03□□□□□ -0.96
ERCC3P19447 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC9.03□□□□□ -0.96
ERCC3P19447 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ERCC3P19447 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
ERCC3P19447 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC9.03□□□□□ -0.96
ERCC3P19447 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC9.03□□□□□ -0.96
ERCC3P19447 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
ERCC3P19447 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
ERCC3P19447 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ERCC3P19447 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ERCC3P19447 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
ERCC3P19447 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ERCC3P19447 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
ERCC3P19447 AL627171.1-201ENST00000618845 1308 ntBASIC9.03□□□□□ -0.96
ERCC3P19447 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC9.03□□□□□ -0.96
ERCC3P19447 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
ERCC3P19447 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
ERCC3P19447 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.96
ERCC3P19447 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC9.02□□□□□ -0.96
ERCC3P19447 AC133552.3-201ENST00000572236 1869 ntBASIC9.02□□□□□ -0.96
ERCC3P19447 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC9.02□□□□□ -0.96
ERCC3P19447 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
ERCC3P19447 IL15-207ENST00000514653 1388 ntTSL 5 BASIC9.02□□□□□ -0.97
ERCC3P19447 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
ERCC3P19447 FMO9P-202ENST00000488458 1535 ntBASIC9.02□□□□□ -0.97
ERCC3P19447 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ERCC3P19447 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
ERCC3P19447 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC9.02□□□□□ -0.97
ERCC3P19447 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
ERCC3P19447 RNA5SP389-201ENST00000362610 115 ntBASIC9.02□□□□□ -0.97
ERCC3P19447 RNA5SP226-201ENST00000362653 115 ntBASIC9.02□□□□□ -0.97
ERCC3P19447 RNA5SP448-201ENST00000363151 111 ntBASIC9.02□□□□□ -0.97
ERCC3P19447 MIR122-201ENST00000385044 85 ntBASIC9.02□□□□□ -0.97
ERCC3P19447 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
ERCC3P19447 RAB9AP4-201ENST00000415230 609 ntBASIC9.02□□□□□ -0.97
ERCC3P19447 AL358942.1-201ENST00000418595 1178 ntBASIC9.02□□□□□ -0.97
ERCC3P19447 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC9.02□□□□□ -0.97
ERCC3P19447 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC9.02□□□□□ -0.97
ERCC3P19447 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC9.02□□□□□ -0.97
ERCC3P19447 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC9.02□□□□□ -0.97
ERCC3P19447 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC9.02□□□□□ -0.97
ERCC3P19447 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
ERCC3P19447 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC9.02□□□□□ -0.97
ERCC3P19447 MTCO1P31-201ENST00000506355 492 ntBASIC9.02□□□□□ -0.97
ERCC3P19447 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC9.02□□□□□ -0.97
ERCC3P19447 AC068134.3-201ENST00000513620 788 ntBASIC9.02□□□□□ -0.97
ERCC3P19447 HMGB1P46-201ENST00000520062 610 ntBASIC9.02□□□□□ -0.97
ERCC3P19447 CHCHD3P2-201ENST00000550751 639 ntBASIC9.02□□□□□ -0.97
ERCC3P19447 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
ERCC3P19447 YWHAZP1-201ENST00000556286 722 ntBASIC9.02□□□□□ -0.97
ERCC3P19447 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC9.02□□□□□ -0.97
ERCC3P19447 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ERCC3P19447 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC9.02□□□□□ -0.97
ERCC3P19447 AC068620.3-201ENST00000602749 560 ntBASIC9.02□□□□□ -0.97
ERCC3P19447 AC097641.3-201ENST00000613523 464 ntBASIC9.02□□□□□ -0.97
ERCC3P19447 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
ERCC3P19447 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
ERCC3P19447 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC9.02□□□□□ -0.97
ERCC3P19447 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ERCC3P19447 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ERCC3P19447 FBXO36-201ENST00000283946 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ERCC3P19447 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC9.02□□□□□ -0.97
ERCC3P19447 GTF2IP1-202ENST00000614592 2047 ntBASIC9.02□□□□□ -0.97
ERCC3P19447 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC9.02□□□□□ -0.97
ERCC3P19447 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC9.02□□□□□ -0.97
ERCC3P19447 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC9.01□□□□□ -0.97
ERCC3P19447 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ERCC3P19447 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ERCC3P19447 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC9.01□□□□□ -0.97
ERCC3P19447 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
ERCC3P19447 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
ERCC3P19447 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ERCC3P19447 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
ERCC3P19447 MIR365B-201ENST00000362317 111 ntBASIC9.01□□□□□ -0.97
ERCC3P19447 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC9.01□□□□□ -0.97
ERCC3P19447 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms