Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC6.66□□□□□ -1.34
P04436 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
P04436 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
P04436 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.65□□□□□ -1.34
P04436 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
P04436 AC006116.1-201ENST00000587908 2171 ntBASIC6.65□□□□□ -1.34
P04436 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
P04436 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.34
P04436 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
P04436 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC6.65□□□□□ -1.34
P04436 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
P04436 MAPK10-279ENST00000641157 2449 ntBASIC6.65□□□□□ -1.34
P04436 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.65□□□□□ -1.34
P04436 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
P04436 MIR431-201ENST00000385266 114 ntBASIC6.65□□□□□ -1.34
P04436 AL139135.1-201ENST00000412675 209 ntBASIC6.65□□□□□ -1.34
P04436 AC127537.1-201ENST00000418183 748 ntBASIC6.65□□□□□ -1.34
P04436 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
P04436 AL627308.2-201ENST00000420014 432 ntBASIC6.65□□□□□ -1.34
P04436 AL359633.1-201ENST00000421403 310 ntBASIC6.65□□□□□ -1.34
P04436 RPL5P6-201ENST00000425640 886 ntBASIC6.65□□□□□ -1.34
P04436 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.65□□□□□ -1.34
P04436 DNAJA1P6-201ENST00000437347 354 ntBASIC6.65□□□□□ -1.34
P04436 RPL29P7-201ENST00000440227 457 ntBASIC6.65□□□□□ -1.34
P04436 AL583856.1-201ENST00000454078 1101 ntBASIC6.65□□□□□ -1.34
P04436 RN7SL456P-201ENST00000469290 295 ntBASIC6.65□□□□□ -1.34
P04436 AC018639.1-201ENST00000492994 442 ntBASIC6.65□□□□□ -1.34
P04436 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
P04436 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.65□□□□□ -1.34
P04436 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC6.65□□□□□ -1.34
P04436 CASP1P2-201ENST00000526830 1258 ntBASIC6.65□□□□□ -1.34
P04436 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.65□□□□□ -1.34
P04436 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC6.65□□□□□ -1.34
P04436 AC068802.1-201ENST00000603420 732 ntBASIC6.65□□□□□ -1.34
P04436 AC113361.1-201ENST00000606683 543 ntBASIC6.65□□□□□ -1.34
P04436 Z93930.3-201ENST00000607919 749 ntBASIC6.65□□□□□ -1.34
P04436 AL031777.2-201ENST00000611953 196 ntBASIC6.65□□□□□ -1.34
P04436 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC6.65□□□□□ -1.34
P04436 AL121985.2-201ENST00000621192 555 ntBASIC6.65□□□□□ -1.34
P04436 AC027506.1-201ENST00000621395 198 ntBASIC6.65□□□□□ -1.34
P04436 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
P04436 OR7E161P-202ENST00000641994 1033 ntBASIC6.65□□□□□ -1.34
P04436 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
P04436 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
P04436 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC6.65□□□□□ -1.35
P04436 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
P04436 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
P04436 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
P04436 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
P04436 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
P04436 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
P04436 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
P04436 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
P04436 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
P04436 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
P04436 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC6.65□□□□□ -1.35
P04436 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
P04436 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC6.65□□□□□ -1.35
P04436 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC6.65□□□□□ -1.35
P04436 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
P04436 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
P04436 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
P04436 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC6.64□□□□□ -1.35
P04436 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
P04436 AC010886.1-201ENST00000437380 2869 ntBASIC6.64□□□□□ -1.35
P04436 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
P04436 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
P04436 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
P04436 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
P04436 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
P04436 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
P04436 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
P04436 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
P04436 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC6.64□□□□□ -1.35
P04436 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC6.64□□□□□ -1.35
P04436 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
P04436 MIR27A-201ENST00000385073 78 ntBASIC6.64□□□□□ -1.35
P04436 RNA5SP35-201ENST00000391257 129 ntBASIC6.64□□□□□ -1.35
P04436 RPL5P8-201ENST00000396820 815 ntBASIC6.64□□□□□ -1.35
P04436 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
P04436 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.64□□□□□ -1.35
P04436 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
P04436 GEMIN2P2-201ENST00000418195 715 ntBASIC6.64□□□□□ -1.35
P04436 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC6.64□□□□□ -1.35
P04436 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.64□□□□□ -1.35
P04436 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.64□□□□□ -1.35
P04436 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC6.64□□□□□ -1.35
P04436 RPS7P4-201ENST00000444127 582 ntBASIC6.64□□□□□ -1.35
P04436 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC6.64□□□□□ -1.35
P04436 CYCSP44-201ENST00000448560 313 ntBASIC6.64□□□□□ -1.35
P04436 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.64□□□□□ -1.35
P04436 MYL6P4-201ENST00000477911 453 ntBASIC6.64□□□□□ -1.35
P04436 AC025271.1-201ENST00000485045 429 ntBASIC6.64□□□□□ -1.35
P04436 AC008967.1-201ENST00000504843 163 ntBASIC6.64□□□□□ -1.35
P04436 NACAP6-201ENST00000509572 622 ntBASIC6.64□□□□□ -1.35
P04436 RPL10P18-201ENST00000519384 309 ntBASIC6.64□□□□□ -1.35
P04436 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.64□□□□□ -1.35
P04436 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.64□□□□□ -1.35
P04436 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC6.64□□□□□ -1.35
P04436 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms