Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 PRELID1P3-201ENST00000450055 643 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC6.88□□□□□ -1.31
SCN2BO60939 AGKP1-201ENST00000455254 1263 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCN2BO60939 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 AC022730.2-201ENST00000465359 452 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 RN7SL88P-201ENST00000480166 299 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC6.88□□□□□ -1.31
SCN2BO60939 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC6.88□□□□□ -1.31
SCN2BO60939 ADI1P2-201ENST00000514945 429 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC6.88□□□□□ -1.31
SCN2BO60939 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC6.88□□□□□ -1.31
SCN2BO60939 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC6.88□□□□□ -1.31
SCN2BO60939 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC6.88□□□□□ -1.31
SCN2BO60939 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCN2BO60939 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.88□□□□□ -1.31
SCN2BO60939 AC099508.2-201ENST00000563098 510 ntTSL 3 BASIC6.88□□□□□ -1.31
SCN2BO60939 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC6.88□□□□□ -1.31
SCN2BO60939 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.88□□□□□ -1.31
SCN2BO60939 RN7SL664P-201ENST00000584239 305 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 AC023513.1-201ENST00000604396 691 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 AL355333.1-201ENST00000605632 279 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 AC243830.2-201ENST00000618067 630 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 BX005195.1-201ENST00000618097 1198 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 AL669830.1-201ENST00000621457 656 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 uc_338.21-201ENST00000622458 147 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 AC034111.1-201ENST00000562143 3770 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCN2BO60939 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCN2BO60939 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCN2BO60939 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCN2BO60939 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
SCN2BO60939 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCN2BO60939 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.88□□□□□ -1.31
SCN2BO60939 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCN2BO60939 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCN2BO60939 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
SCN2BO60939 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SCN2BO60939 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SCN2BO60939 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC6.87□□□□□ -1.31
SCN2BO60939 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN2BO60939 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.87□□□□□ -1.31
SCN2BO60939 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN2BO60939 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN2BO60939 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN2BO60939 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN2BO60939 RNA5SP238-201ENST00000365464 120 ntBASIC6.87□□□□□ -1.31
SCN2BO60939 RAN-201ENST00000392367 780 ntTSL 5 BASIC6.87□□□□□ -1.31
SCN2BO60939 CES5AP1-201ENST00000400418 859 ntBASIC6.87□□□□□ -1.31
SCN2BO60939 AC092066.1-201ENST00000425131 317 ntBASIC6.87□□□□□ -1.31
SCN2BO60939 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SCN2BO60939 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC6.87□□□□□ -1.31
SCN2BO60939 AC245047.1-201ENST00000433276 873 ntBASIC6.87□□□□□ -1.31
SCN2BO60939 RPS13P2-201ENST00000437890 455 ntBASIC6.87□□□□□ -1.31
SCN2BO60939 AC090954.1-201ENST00000445502 361 ntBASIC6.87□□□□□ -1.31
SCN2BO60939 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SCN2BO60939 RPS10P20-201ENST00000494130 463 ntBASIC6.87□□□□□ -1.31
SCN2BO60939 PABPC1P1-201ENST00000506347 591 ntBASIC6.87□□□□□ -1.31
SCN2BO60939 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC6.87□□□□□ -1.31
SCN2BO60939 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC6.87□□□□□ -1.31
SCN2BO60939 AC013643.2-201ENST00000521510 584 ntTSL 4 BASIC6.87□□□□□ -1.31
SCN2BO60939 OR7E2P-201ENST00000533071 889 ntBASIC6.87□□□□□ -1.31
SCN2BO60939 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC6.87□□□□□ -1.31
SCN2BO60939 AL365223.1-201ENST00000574864 1297 ntBASIC6.87□□□□□ -1.31
SCN2BO60939 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SCN2BO60939 AP000436.1-201ENST00000605239 800 ntBASIC6.87□□□□□ -1.31
SCN2BO60939 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
SCN2BO60939 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC6.87□□□□□ -1.31
SCN2BO60939 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC6.87□□□□□ -1.31
SCN2BO60939 C18orf12-201ENST00000623329 537 ntBASIC6.87□□□□□ -1.31
SCN2BO60939 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC6.87□□□□□ -1.31
SCN2BO60939 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.87□□□□□ -1.31
SCN2BO60939 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
SCN2BO60939 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
SCN2BO60939 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.87□□□□□ -1.31
SCN2BO60939 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.87□□□□□ -1.31
SCN2BO60939 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN2BO60939 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN2BO60939 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SCN2BO60939 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
SCN2BO60939 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN2BO60939 KARSP2-201ENST00000415696 1639 ntBASIC6.87□□□□□ -1.31
SCN2BO60939 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN2BO60939 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
SCN2BO60939 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.86□□□□□ -1.31
SCN2BO60939 AL157713.1-201ENST00000379752 1531 ntBASIC6.86□□□□□ -1.31
SCN2BO60939 VEZF1P1-201ENST00000423931 1541 ntBASIC6.86□□□□□ -1.31
SCN2BO60939 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SCN2BO60939 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SCN2BO60939 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SCN2BO60939 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.86□□□□□ -1.31
SCN2BO60939 AC061975.5-201ENST00000584928 1441 ntBASIC6.86□□□□□ -1.31
SCN2BO60939 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SCN2BO60939 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SCN2BO60939 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.86□□□□□ -1.31
SCN2BO60939 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SCN2BO60939 RNA5SP297-201ENST00000391029 113 ntBASIC6.86□□□□□ -1.31
SCN2BO60939 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.86□□□□□ -1.31
SCN2BO60939 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms