Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 MED15P9-201ENST00000424716 533 ntBASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 AL354983.1-201ENST00000434580 906 ntBASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 RPL21P33-201ENST00000444831 484 ntBASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 RN7SL392P-201ENST00000473024 299 ntBASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 AC096743.1-201ENST00000485172 319 ntBASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 RN7SL775P-201ENST00000498361 336 ntBASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 GAPDHP38-201ENST00000503632 1002 ntBASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 IGLV1-62-201ENST00000518003 441 ntBASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 AC087257.2-201ENST00000538759 928 ntBASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 OR4N3P-201ENST00000559395 818 ntBASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 AC113361.1-201ENST00000606683 543 ntBASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 AC097381.3-201ENST00000608962 462 ntBASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 AC135068.4-201ENST00000622949 925 ntBASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 AC130448.2-201ENST00000624082 374 ntBASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 AL590396.3-201ENST00000636334 300 ntBASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RSPO3Q9BXY4 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 RNA5SP301-201ENST00000362537 121 ntBASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 AC006511.2-201ENST00000388966 660 ntBASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 RNU6-1055P-201ENST00000391085 107 ntBASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 RPSAP62-201ENST00000432596 833 ntBASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 RPL6P24-201ENST00000445338 864 ntBASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 PMS2P11-201ENST00000451831 574 ntBASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 TAAR3P-201ENST00000466706 1078 ntBASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 RPL23AP8-201ENST00000479812 475 ntBASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 TAAR3P-202ENST00000481759 1025 ntBASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 RN7SL314P-201ENST00000490735 292 ntBASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 AL365223.1-201ENST00000574864 1297 ntBASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 CCDC58P1-201ENST00000578567 430 ntBASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 AP001120.4-201ENST00000590231 108 ntBASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 AL121809.2-201ENST00000613169 341 ntBASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 TMEM14EP-202ENST00000639378 1296 ntBASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
RSPO3Q9BXY4 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC6.6□□□□□ -1.35
RSPO3Q9BXY4 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms