Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 NXT2-204ENST00000372107 937 ntTSL 3 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AL450124.1-201ENST00000376401 353 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 RAP1BP3-201ENST00000407180 549 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 Y_RNA.619-201ENST00000410951 90 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 OR51B3P-201ENST00000412287 913 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AC009237.9-201ENST00000414800 347 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AL158827.1-201ENST00000416300 391 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 RBM22P7-201ENST00000421321 280 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AC019205.1-201ENST00000421830 730 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AL035246.1-201ENST00000433554 1255 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 RPS18P13-201ENST00000461260 454 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 RN7SL335P-201ENST00000482790 304 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AC006070.1-201ENST00000508151 193 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AC021451.1-201ENST00000523498 1129 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AC013652.1-206ENST00000558277 789 ntTSL 2 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 NDUFAF4P1-201ENST00000559425 519 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 MIR4509-3-201ENST00000578671 94 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 MIR4509-2-201ENST00000583920 94 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 DEFB131E-202ENST00000602581 683 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AC068620.3-201ENST00000602749 560 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 MARK3P1-201ENST00000604796 643 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AL139041.1-201ENST00000605480 610 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 U1.22-201ENST00000605806 164 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AP002360.4-201ENST00000606980 481 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AC239868.4-201ENST00000608318 671 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AL157392.3-206ENST00000614899 822 ntTSL 5 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AC009318.3-201ENST00000616916 503 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 MIR4509-1-201ENST00000618224 94 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AL590396.4-201ENST00000636779 956 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AC021755.1-201ENST00000559747 1447 ntBASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 AL109810.2-201ENST00000425559 1348 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 FBXO36-201ENST00000283946 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
SHKBP1Q8TBC3 PHF2P2-202ENST00000444553 2865 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 MAPK10-347ENST00000641762 2856 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 TCTN1-201ENST00000377654 1539 ntTSL 5 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AC026356.1-201ENST00000622688 1357 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AC093117.1-201ENST00000413541 2171 ntTSL 2 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AC073324.1-201ENST00000425993 1435 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AL049697.3-201ENST00000406493 982 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 LIPT1P1-201ENST00000415870 1186 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 BX119904.3-201ENST00000428194 957 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 DNAJA1P6-201ENST00000437347 354 ntBASIC8.24□□□□□ -1.09
SHKBP1Q8TBC3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms