Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
FREM3P0C091 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC6.58□□□□□ -1.36
FREM3P0C091 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC6.58□□□□□ -1.36
FREM3P0C091 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
FREM3P0C091 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.58□□□□□ -1.36
FREM3P0C091 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC6.58□□□□□ -1.36
FREM3P0C091 AC134698.1-201ENST00000511619 643 ntBASIC6.58□□□□□ -1.36
FREM3P0C091 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.58□□□□□ -1.36
FREM3P0C091 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.58□□□□□ -1.36
FREM3P0C091 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC6.58□□□□□ -1.36
FREM3P0C091 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC6.58□□□□□ -1.36
FREM3P0C091 pRNA.9-201ENST00000618609 89 ntBASIC6.58□□□□□ -1.36
FREM3P0C091 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
FREM3P0C091 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FREM3P0C091 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
FREM3P0C091 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.57□□□□□ -1.36
FREM3P0C091 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC6.57□□□□□ -1.36
FREM3P0C091 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
FREM3P0C091 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
FREM3P0C091 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
FREM3P0C091 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
FREM3P0C091 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC6.57□□□□□ -1.36
FREM3P0C091 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
FREM3P0C091 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC6.57□□□□□ -1.36
FREM3P0C091 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC6.57□□□□□ -1.36
FREM3P0C091 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
FREM3P0C091 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FREM3P0C091 RNA5SP218-201ENST00000363188 109 ntBASIC6.57□□□□□ -1.36
FREM3P0C091 RPL5P5-201ENST00000392009 893 ntBASIC6.57□□□□□ -1.36
FREM3P0C091 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.57□□□□□ -1.36
FREM3P0C091 SOD1P1-201ENST00000407803 440 ntBASIC6.57□□□□□ -1.36
FREM3P0C091 RNA5SP280-201ENST00000411230 115 ntBASIC6.57□□□□□ -1.36
FREM3P0C091 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.57□□□□□ -1.36
FREM3P0C091 RPL5P34-201ENST00000426545 891 ntBASIC6.57□□□□□ -1.36
FREM3P0C091 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.57□□□□□ -1.36
FREM3P0C091 RPL5P9-201ENST00000448118 886 ntBASIC6.57□□□□□ -1.36
FREM3P0C091 RPL34P34-201ENST00000465389 354 ntBASIC6.57□□□□□ -1.36
FREM3P0C091 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.57□□□□□ -1.36
FREM3P0C091 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC6.57□□□□□ -1.36
FREM3P0C091 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC6.57□□□□□ -1.36
FREM3P0C091 AC011611.6-201ENST00000547483 255 ntBASIC6.57□□□□□ -1.36
FREM3P0C091 MYL6-211ENST00000548580 528 ntTSL 2 BASIC6.57□□□□□ -1.36
FREM3P0C091 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.57□□□□□ -1.36
FREM3P0C091 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.57□□□□□ -1.36
FREM3P0C091 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.57□□□□□ -1.36
FREM3P0C091 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC6.57□□□□□ -1.36
FREM3P0C091 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.57□□□□□ -1.36
FREM3P0C091 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.57□□□□□ -1.36
FREM3P0C091 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.57□□□□□ -1.36
FREM3P0C091 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
FREM3P0C091 AC034111.1-201ENST00000562143 3770 ntBASIC6.57□□□□□ -1.36
FREM3P0C091 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.57□□□□□ -1.36
FREM3P0C091 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
FREM3P0C091 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC6.57□□□□□ -1.36
FREM3P0C091 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FREM3P0C091 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC6.57□□□□□ -1.36
FREM3P0C091 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC6.57□□□□□ -1.36
FREM3P0C091 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
FREM3P0C091 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
FREM3P0C091 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
FREM3P0C091 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FREM3P0C091 FADS2P1-201ENST00000611807 1446 ntBASIC6.57□□□□□ -1.36
FREM3P0C091 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC6.57□□□□□ -1.36
FREM3P0C091 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.56□□□□□ -1.36
FREM3P0C091 RNA5SP429-201ENST00000363688 109 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 RN7SKP174-201ENST00000363803 330 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 RN7SKP118-201ENST00000364331 330 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 RNA5SP355-201ENST00000365317 135 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FREM3P0C091 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.56□□□□□ -1.36
FREM3P0C091 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
FREM3P0C091 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
FREM3P0C091 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
FREM3P0C091 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.56□□□□□ -1.36
FREM3P0C091 AL139135.1-201ENST00000412675 209 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FREM3P0C091 AL354794.2-201ENST00000424795 1248 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 MTND1P10-201ENST00000426108 832 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 GAPDHP51-201ENST00000426454 1000 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 AC093799.1-201ENST00000452411 499 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 SCDP1-201ENST00000455244 1081 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 RPS4XP19-201ENST00000460237 736 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC6.56□□□□□ -1.36
FREM3P0C091 AC055733.3-201ENST00000505214 523 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 NACAP6-201ENST00000509572 622 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.56□□□□□ -1.36
FREM3P0C091 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FREM3P0C091 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC6.56□□□□□ -1.36
FREM3P0C091 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FREM3P0C091 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.56□□□□□ -1.36
FREM3P0C091 AC137695.2-201ENST00000603123 754 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.56□□□□□ -1.36
FREM3P0C091 MIR6070-201ENST00000613967 103 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FREM3P0C091 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FREM3P0C091 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FREM3P0C091 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FREM3P0C091 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
FREM3P0C091 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms