Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 RNA5SP396-201ENST00000364834 120 ntBASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 RAC1P4-201ENST00000419413 579 ntBASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 AC117434.1-201ENST00000419971 836 ntBASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 EEF1GP7-201ENST00000422983 703 ntBASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 ATP5LP4-201ENST00000434169 307 ntBASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 AC015820.1-201ENST00000473882 321 ntBASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 RN7SL153P-201ENST00000486501 292 ntBASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 GCSHP1-201ENST00000512554 484 ntBASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 AC110760.3-202ENST00000515177 371 ntBASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 RN7SKP242-201ENST00000515967 289 ntBASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 OR6M3P-201ENST00000531567 700 ntBASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 AC018523.1-201ENST00000534211 512 ntBASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 AC068408.1-201ENST00000577406 1144 ntBASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 AL133406.3-201ENST00000606817 541 ntBASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 pRNA.9-201ENST00000618609 89 ntBASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 AC009269.6-201ENST00000621778 588 ntBASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 AC233280.20-201ENST00000637412 416 ntBASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
CDK5RAP1Q96SZ6 MFSD8-218ENST00000641186 4448 ntBASIC7.77□□□□□ -1.16
CDK5RAP1Q96SZ6 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 RNU1-38P-201ENST00000362817 144 ntBASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 RNA5SP238-201ENST00000365464 120 ntBASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 NIP7P1-201ENST00000433227 512 ntBASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 UBE2V2P3-201ENST00000433562 437 ntBASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 MTCYBP11-201ENST00000447254 1109 ntBASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 MTND6P32-201ENST00000457611 483 ntBASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 AC008040.4-201ENST00000494834 768 ntBASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 IGKV2-29-201ENST00000521304 372 ntBASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 AP001994.1-201ENST00000527539 826 ntBASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 AC084033.1-201ENST00000550830 633 ntBASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 AL132640.2-202ENST00000559732 614 ntBASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 IGHV1OR15-3-201ENST00000564926 351 ntBASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 AC105275.2-201ENST00000567907 711 ntBASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 AC091304.5-201ENST00000568969 158 ntBASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 RN7SL697P-201ENST00000582484 299 ntBASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 AC073488.7-201ENST00000633785 778 ntBASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 HDAC1P1-201ENST00000455482 1445 ntBASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 RERE-203ENST00000400907 2973 ntTSL 5 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms