Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 RNA5SP301-201ENST00000362537 121 ntBASIC6.88□□□□□ -1.31
SNX18Q96RF0 RN7SKP50-201ENST00000364694 315 ntBASIC6.88□□□□□ -1.31
SNX18Q96RF0 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 RPSAP59-201ENST00000421048 890 ntBASIC6.88□□□□□ -1.31
SNX18Q96RF0 RPL4P4-201ENST00000422486 1284 ntBASIC6.88□□□□□ -1.31
SNX18Q96RF0 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 AC025262.1-201ENST00000434563 589 ntTSL 5 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 AC245047.6-201ENST00000445444 617 ntBASIC6.88□□□□□ -1.31
SNX18Q96RF0 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 MTND3P4-201ENST00000453537 303 ntBASIC6.88□□□□□ -1.31
SNX18Q96RF0 PA2G4P4-201ENST00000473864 1182 ntBASIC6.88□□□□□ -1.31
SNX18Q96RF0 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 CA1-219ENST00000523022 1208 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 AC025857.1-201ENST00000525252 377 ntBASIC6.88□□□□□ -1.31
SNX18Q96RF0 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 AL356800.1-201ENST00000553339 735 ntBASIC6.88□□□□□ -1.31
SNX18Q96RF0 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 IGHV1OR15-4-201ENST00000560037 348 ntBASIC6.88□□□□□ -1.31
SNX18Q96RF0 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 AC018558.5-201ENST00000565840 952 ntBASIC6.88□□□□□ -1.31
SNX18Q96RF0 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 DTNA-220ENST00000590831 847 ntTSL 2 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 AC093063.1-201ENST00000599317 363 ntBASIC6.88□□□□□ -1.31
SNX18Q96RF0 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 OR7A18P-201ENST00000600416 277 ntBASIC6.88□□□□□ -1.31
SNX18Q96RF0 AC015849.6-201ENST00000605454 474 ntBASIC6.88□□□□□ -1.31
SNX18Q96RF0 AC024933.1-201ENST00000608472 348 ntBASIC6.88□□□□□ -1.31
SNX18Q96RF0 RN7SL3-201ENST00000610674 299 ntBASIC6.88□□□□□ -1.31
SNX18Q96RF0 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 AC134981.1-201ENST00000628076 348 ntBASIC6.88□□□□□ -1.31
SNX18Q96RF0 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 AC122713.2-201ENST00000624942 3335 ntBASIC6.88□□□□□ -1.31
SNX18Q96RF0 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 MFSD8-218ENST00000641186 4448 ntBASIC6.87□□□□□ -1.31
SNX18Q96RF0 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SNX18Q96RF0 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SNX18Q96RF0 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 TDRD12-201ENST00000421545 1317 ntTSL 5 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 AC233968.1-201ENST00000611212 1300 ntBASIC6.87□□□□□ -1.31
SNX18Q96RF0 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SNX18Q96RF0 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SNX18Q96RF0 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 AC133644.1-201ENST00000398171 937 ntBASIC6.87□□□□□ -1.31
SNX18Q96RF0 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 SETP10-201ENST00000424368 814 ntBASIC6.87□□□□□ -1.31
SNX18Q96RF0 AL136452.1-201ENST00000448495 439 ntBASIC6.87□□□□□ -1.31
SNX18Q96RF0 ATP5G1P6-201ENST00000451206 412 ntBASIC6.87□□□□□ -1.31
SNX18Q96RF0 TPRKBP1-201ENST00000456243 481 ntBASIC6.87□□□□□ -1.31
SNX18Q96RF0 RPL12P40-201ENST00000467028 488 ntBASIC6.87□□□□□ -1.31
SNX18Q96RF0 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SNX18Q96RF0 NMNAT1P4-201ENST00000505598 840 ntBASIC6.87□□□□□ -1.31
SNX18Q96RF0 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 SETP12-201ENST00000514068 805 ntBASIC6.87□□□□□ -1.31
SNX18Q96RF0 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 AC087280.1-201ENST00000530632 1003 ntBASIC6.87□□□□□ -1.31
SNX18Q96RF0 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 AP004833.3-201ENST00000531893 322 ntBASIC6.87□□□□□ -1.31
SNX18Q96RF0 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 AC006120.1-201ENST00000579375 546 ntBASIC6.87□□□□□ -1.31
SNX18Q96RF0 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 AC016629.2-201ENST00000597341 199 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms