Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 GLRXP3-201ENST00000470810 321 ntBASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 RN7SL775P-201ENST00000498361 336 ntBASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 AC013283.1-201ENST00000557282 492 ntBASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 OR4N3P-201ENST00000559395 818 ntBASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 AC092368.2-201ENST00000565911 600 ntBASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 RPSAP66-201ENST00000592196 606 ntBASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 AL512413.1-201ENST00000606489 382 ntBASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 AC012510.1-201ENST00000607946 759 ntBASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 AC007204.1-201ENST00000621794 555 ntBASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 AC135068.4-201ENST00000622949 925 ntBASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
C9orf40Q8IXQ3 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
C9orf40Q8IXQ3 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
C9orf40Q8IXQ3 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 U3.14-201ENST00000365363 227 ntBASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 EAF2-202ENST00000451944 960 ntTSL 2 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 TUBBP11-201ENST00000472255 252 ntBASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 AC008967.1-201ENST00000504843 163 ntBASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 AC008417.1-201ENST00000510014 565 ntBASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 AP003084.1-201ENST00000524828 742 ntBASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 HNRNPCP8-201ENST00000528764 888 ntBASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 OR4C1P-201ENST00000530880 937 ntBASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 SAA3P-201ENST00000533267 365 ntBASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 NF1P12-201ENST00000549593 583 ntBASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 RN7SL667P-201ENST00000582817 298 ntBASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 MIR4470-201ENST00000583453 72 ntBASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 AC027271.1-201ENST00000610270 610 ntBASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 COL6A4P1-202ENST00000487147 4317 ntBASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 AL035555.1-201ENST00000404462 1790 ntBASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
C9orf40Q8IXQ3 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.7□□□□□ -1.34
C9orf40Q8IXQ3 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
C9orf40Q8IXQ3 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
C9orf40Q8IXQ3 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
C9orf40Q8IXQ3 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
C9orf40Q8IXQ3 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.7□□□□□ -1.34
C9orf40Q8IXQ3 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC6.7□□□□□ -1.34
C9orf40Q8IXQ3 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
C9orf40Q8IXQ3 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms