Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 WNK1-220ENST00000574564 1401 ntBASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 HMGB3P1-201ENST00000393368 573 ntBASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 AL035467.1-201ENST00000403583 686 ntBASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 SNORA2C-201ENST00000408564 137 ntBASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 AL354794.2-201ENST00000424795 1248 ntBASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 AC012493.1-201ENST00000453252 760 ntBASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 AC026336.1-201ENST00000466577 351 ntBASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 AC015820.1-201ENST00000473882 321 ntBASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 AP000619.1-201ENST00000540293 1000 ntBASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 AC090099.1-204ENST00000623626 849 ntBASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 GAS2-210ENST00000630668 674 ntTSL 5 BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 CYP2G2P-201ENST00000594920 1485 ntBASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC50Q8IVM0 EEF1A1P5-201ENST00000436459 1389 ntBASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 RPL4P4-201ENST00000422486 1284 ntBASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 PYHIN5P-201ENST00000431627 723 ntBASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 SS18L2P1-201ENST00000445923 213 ntBASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 VN1R6P-201ENST00000458417 907 ntBASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 AC109454.1-201ENST00000471205 498 ntBASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 AC084878.1-201ENST00000480555 648 ntBASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 SAA3P-201ENST00000533267 365 ntBASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 AC015674.1-201ENST00000578482 267 ntBASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 MIR4642-201ENST00000583943 82 ntBASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 AC103724.4-201ENST00000605981 292 ntBASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 AL353608.4-201ENST00000624487 1188 ntBASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC50Q8IVM0 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.71□□□□□ -1.17
CCDC50Q8IVM0 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
CCDC50Q8IVM0 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.71□□□□□ -1.17
CCDC50Q8IVM0 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CCDC50Q8IVM0 CREM-218ENST00000460270 1416 ntTSL 2 BASIC7.71□□□□□ -1.17
CCDC50Q8IVM0 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CCDC50Q8IVM0 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
CCDC50Q8IVM0 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms