Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.87□□□□□ -1.31
SUMO3P55854 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SUMO3P55854 OR7E1P-201ENST00000533891 958 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC6.87□□□□□ -1.31
SUMO3P55854 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SUMO3P55854 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SUMO3P55854 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC6.87□□□□□ -1.31
SUMO3P55854 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.87□□□□□ -1.31
SUMO3P55854 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC6.87□□□□□ -1.31
SUMO3P55854 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
SUMO3P55854 OR4F28P-201ENST00000559128 938 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.87□□□□□ -1.31
SUMO3P55854 AC010547.7-201ENST00000570323 333 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 MIR5192-201ENST00000579892 92 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 RN7SL25P-201ENST00000583862 260 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 OR4F8P-201ENST00000589943 937 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.87□□□□□ -1.31
SUMO3P55854 OR4H6P-202ENST00000603819 340 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 AC026790.2-201ENST00000606282 430 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 PCA3_2.1-201ENST00000612507 409 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 AL512506.1-201ENST00000613918 449 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 AC143336.1-201ENST00000614164 836 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 GAS2-210ENST00000630668 674 ntTSL 5 BASIC6.87□□□□□ -1.31
SUMO3P55854 AC073488.2-201ENST00000631903 751 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 AC119674.1-201ENST00000641611 1210 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SUMO3P55854 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
SUMO3P55854 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC6.87□□□□□ -1.31
SUMO3P55854 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC6.87□□□□□ -1.31
SUMO3P55854 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC6.87□□□□□ -1.31
SUMO3P55854 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SUMO3P55854 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SUMO3P55854 ZNF840P-201ENST00000504759 1996 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.87□□□□□ -1.31
SUMO3P55854 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
SUMO3P55854 AC051619.3-201ENST00000560646 2426 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 AC016831.3-201ENST00000446451 1723 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.87□□□□□ -1.31
SUMO3P55854 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
SUMO3P55854 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
SUMO3P55854 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
SUMO3P55854 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.86□□□□□ -1.31
SUMO3P55854 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
SUMO3P55854 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.86□□□□□ -1.31
SUMO3P55854 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC6.86□□□□□ -1.31
SUMO3P55854 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
SUMO3P55854 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 AL606490.2-201ENST00000457562 1330 ntBASIC6.86□□□□□ -1.31
SUMO3P55854 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC6.86□□□□□ -1.31
SUMO3P55854 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 NXT2-204ENST00000372107 937 ntTSL 3 BASIC6.86□□□□□ -1.31
SUMO3P55854 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 SNORA68-201ENST00000384437 133 ntBASIC6.86□□□□□ -1.31
SUMO3P55854 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.86□□□□□ -1.31
SUMO3P55854 RAET1K-201ENST00000403651 784 ntBASIC6.86□□□□□ -1.31
SUMO3P55854 SNX18P3-201ENST00000424993 835 ntBASIC6.86□□□□□ -1.31
SUMO3P55854 RPL5P6-201ENST00000425640 886 ntBASIC6.86□□□□□ -1.31
SUMO3P55854 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC6.86□□□□□ -1.31
SUMO3P55854 AL357632.1-201ENST00000426688 643 ntBASIC6.86□□□□□ -1.31
SUMO3P55854 MTND4LP7-201ENST00000431728 294 ntBASIC6.86□□□□□ -1.31
SUMO3P55854 HBBP1-201ENST00000433329 439 ntBASIC6.86□□□□□ -1.31
SUMO3P55854 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.86□□□□□ -1.31
SUMO3P55854 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC6.86□□□□□ -1.31
SUMO3P55854 SS18L2P1-201ENST00000445923 213 ntBASIC6.86□□□□□ -1.31
SUMO3P55854 AL583856.1-201ENST00000454078 1101 ntBASIC6.86□□□□□ -1.31
SUMO3P55854 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.86□□□□□ -1.31
SUMO3P55854 RPL7AP56-201ENST00000476420 791 ntBASIC6.86□□□□□ -1.31
SUMO3P55854 GCSHP1-201ENST00000512554 484 ntBASIC6.86□□□□□ -1.31
SUMO3P55854 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC6.86□□□□□ -1.31
SUMO3P55854 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC6.86□□□□□ -1.31
SUMO3P55854 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC6.86□□□□□ -1.31
SUMO3P55854 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC6.86□□□□□ -1.31
SUMO3P55854 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC6.86□□□□□ -1.31
SUMO3P55854 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC6.86□□□□□ -1.31
SUMO3P55854 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC6.86□□□□□ -1.31
SUMO3P55854 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC6.86□□□□□ -1.31
SUMO3P55854 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC6.86□□□□□ -1.31
SUMO3P55854 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.86□□□□□ -1.31
SUMO3P55854 AL158211.2-201ENST00000607282 395 ntBASIC6.86□□□□□ -1.31
SUMO3P55854 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 AC006453.5-201ENST00000636451 619 ntBASIC6.86□□□□□ -1.31
SUMO3P55854 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC6.86□□□□□ -1.31
SUMO3P55854 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC6.86□□□□□ -1.31
SUMO3P55854 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SUMO3P55854 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms