Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HLA-DRB4X5D2U9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
HLA-DRB4X5D2U9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 CYP2T3P-201ENST00000601990 817 ntBASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 AC092666.2-201ENST00000613287 246 ntBASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
HLA-DRB4X5D2U9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 AC010980.2-201ENST00000587099 1412 ntBASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 KRT18P68-201ENST00000392293 1000 ntBASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 AC105020.6-201ENST00000621523 1217 ntBASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DRB4X5D2U9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 AC006970.2-201ENST00000450065 779 ntBASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 AF201337.1-201ENST00000520239 748 ntBASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 AL589743.5-201ENST00000616611 1050 ntBASIC15.02■□□□□ -0
HLA-DRB4X5D2U9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DRB4X5D2U9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DRB4X5D2U9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DRB4X5D2U9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DRB4X5D2U9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DRB4X5D2U9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DRB4X5D2U9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DRB4X5D2U9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms