Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CYP46A1Q9Y6A2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.77■■□□□ 1.4
CYP46A1Q9Y6A2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CYP46A1Q9Y6A2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.76■■□□□ 1.39
CYP46A1Q9Y6A2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
CYP46A1Q9Y6A2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CYP46A1Q9Y6A2 MIR935-201ENST00000401179 91 ntBASIC23.76■■□□□ 1.39
CYP46A1Q9Y6A2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.76■■□□□ 1.39
CYP46A1Q9Y6A2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CYP46A1Q9Y6A2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.76■■□□□ 1.39
CYP46A1Q9Y6A2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CYP46A1Q9Y6A2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CYP46A1Q9Y6A2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.76■■□□□ 1.39
CYP46A1Q9Y6A2 KRT8P17-201ENST00000453110 1448 ntBASIC23.76■■□□□ 1.39
CYP46A1Q9Y6A2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CYP46A1Q9Y6A2 AC125437.2-201ENST00000625180 2167 ntBASIC23.75■■□□□ 1.39
CYP46A1Q9Y6A2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.75■■□□□ 1.39
CYP46A1Q9Y6A2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CYP46A1Q9Y6A2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CYP46A1Q9Y6A2 TMEM179-206ENST00000616017 1645 ntBASIC23.75■■□□□ 1.39
CYP46A1Q9Y6A2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.75■■□□□ 1.39
CYP46A1Q9Y6A2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CYP46A1Q9Y6A2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.75■■□□□ 1.39
CYP46A1Q9Y6A2 AL589743.5-201ENST00000616611 1050 ntBASIC23.75■■□□□ 1.39
CYP46A1Q9Y6A2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CYP46A1Q9Y6A2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CYP46A1Q9Y6A2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.75■■□□□ 1.39
CYP46A1Q9Y6A2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC23.75■■□□□ 1.39
CYP46A1Q9Y6A2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CYP46A1Q9Y6A2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CYP46A1Q9Y6A2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CYP46A1Q9Y6A2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.74■■□□□ 1.39
CYP46A1Q9Y6A2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.74■■□□□ 1.39
CYP46A1Q9Y6A2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.74■■□□□ 1.39
CYP46A1Q9Y6A2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.74■■□□□ 1.39
CYP46A1Q9Y6A2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CYP46A1Q9Y6A2 AC073111.5-205ENST00000641717 521 ntBASIC23.74■■□□□ 1.39
CYP46A1Q9Y6A2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.74■■□□□ 1.39
CYP46A1Q9Y6A2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.74■■□□□ 1.39
CYP46A1Q9Y6A2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CYP46A1Q9Y6A2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CYP46A1Q9Y6A2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CYP46A1Q9Y6A2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CYP46A1Q9Y6A2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CYP46A1Q9Y6A2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CYP46A1Q9Y6A2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CYP46A1Q9Y6A2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CYP46A1Q9Y6A2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CYP46A1Q9Y6A2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CYP46A1Q9Y6A2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CYP46A1Q9Y6A2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CYP46A1Q9Y6A2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CYP46A1Q9Y6A2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CYP46A1Q9Y6A2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CYP46A1Q9Y6A2 AL031963.3-201ENST00000606441 850 ntBASIC23.73■■□□□ 1.39
CYP46A1Q9Y6A2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CYP46A1Q9Y6A2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CYP46A1Q9Y6A2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CYP46A1Q9Y6A2 KRT17P1-201ENST00000399211 1546 ntBASIC23.73■■□□□ 1.39
CYP46A1Q9Y6A2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CYP46A1Q9Y6A2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CYP46A1Q9Y6A2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CYP46A1Q9Y6A2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 CDCA4P2-201ENST00000441182 718 ntBASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 AC133552.2-202ENST00000575694 574 ntBASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
CYP46A1Q9Y6A2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CYP46A1Q9Y6A2 KRT8P20-201ENST00000423953 1409 ntBASIC23.71■■□□□ 1.39
CYP46A1Q9Y6A2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CYP46A1Q9Y6A2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CYP46A1Q9Y6A2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.71■■□□□ 1.39
CYP46A1Q9Y6A2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.71■■□□□ 1.39
CYP46A1Q9Y6A2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CYP46A1Q9Y6A2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.71■■□□□ 1.39
CYP46A1Q9Y6A2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.71■■□□□ 1.39
CYP46A1Q9Y6A2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.71■■□□□ 1.39
CYP46A1Q9Y6A2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.71■■□□□ 1.39
CYP46A1Q9Y6A2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.71■■□□□ 1.39
CYP46A1Q9Y6A2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.71■■□□□ 1.39
CYP46A1Q9Y6A2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CYP46A1Q9Y6A2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CYP46A1Q9Y6A2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
CYP46A1Q9Y6A2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms