Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SCN10AQ9Y5Y9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SCN10AQ9Y5Y9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SCN10AQ9Y5Y9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SCN10AQ9Y5Y9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
SCN10AQ9Y5Y9 MIR1238-201ENST00000408483 83 ntBASIC22.08■■□□□ 1.13
SCN10AQ9Y5Y9 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22.08■■□□□ 1.13
SCN10AQ9Y5Y9 YBX1P10-201ENST00000444752 975 ntBASIC22.08■■□□□ 1.13
SCN10AQ9Y5Y9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.08■■□□□ 1.13
SCN10AQ9Y5Y9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.08■■□□□ 1.13
SCN10AQ9Y5Y9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
SCN10AQ9Y5Y9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.08■■□□□ 1.13
SCN10AQ9Y5Y9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
SCN10AQ9Y5Y9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SCN10AQ9Y5Y9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SCN10AQ9Y5Y9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SCN10AQ9Y5Y9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.08■■□□□ 1.13
SCN10AQ9Y5Y9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC22.08■■□□□ 1.12
SCN10AQ9Y5Y9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
SCN10AQ9Y5Y9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC22.08■■□□□ 1.12
SCN10AQ9Y5Y9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.08■■□□□ 1.12
SCN10AQ9Y5Y9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC22.08■■□□□ 1.12
SCN10AQ9Y5Y9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22.08■■□□□ 1.12
SCN10AQ9Y5Y9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.08■■□□□ 1.12
SCN10AQ9Y5Y9 AL049597.2-201ENST00000565575 961 ntBASIC22.08■■□□□ 1.12
SCN10AQ9Y5Y9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.08■■□□□ 1.12
SCN10AQ9Y5Y9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.08■■□□□ 1.12
SCN10AQ9Y5Y9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SCN10AQ9Y5Y9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 SLC25A3P1-201ENST00000443844 931 ntBASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 C2orf69P3-201ENST00000565542 1120 ntBASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 LINC01568-207ENST00000641790 1380 ntBASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 AC073508.3-201ENST00000619697 1419 ntBASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 TERF1P1-201ENST00000311003 1181 ntBASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 HLA-G-202ENST00000376815 851 ntBASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 HLA-G-203ENST00000376818 1127 ntBASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 CR392000.1-201ENST00000624770 1228 ntBASIC22.07■■□□□ 1.12
SCN10AQ9Y5Y9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 KRT8P17-201ENST00000453110 1448 ntBASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 AC012676.1-201ENST00000574705 1949 ntBASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 AC005229.4-201ENST00000610085 2198 ntBASIC22.06■■□□□ 1.12
SCN10AQ9Y5Y9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
SCN10AQ9Y5Y9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.05■■□□□ 1.12
SCN10AQ9Y5Y9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
SCN10AQ9Y5Y9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC22.05■■□□□ 1.12
SCN10AQ9Y5Y9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SCN10AQ9Y5Y9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.05■■□□□ 1.12
SCN10AQ9Y5Y9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SCN10AQ9Y5Y9 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.05■■□□□ 1.12
SCN10AQ9Y5Y9 EP400NL-214ENST00000641289 2402 ntBASIC22.05■■□□□ 1.12
SCN10AQ9Y5Y9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SCN10AQ9Y5Y9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SCN10AQ9Y5Y9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
SCN10AQ9Y5Y9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
SCN10AQ9Y5Y9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SCN10AQ9Y5Y9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SCN10AQ9Y5Y9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.05■■□□□ 1.12
SCN10AQ9Y5Y9 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC22.05■■□□□ 1.12
SCN10AQ9Y5Y9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.05■■□□□ 1.12
SCN10AQ9Y5Y9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.05■■□□□ 1.12
SCN10AQ9Y5Y9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.05■■□□□ 1.12
SCN10AQ9Y5Y9 AL031985.4-201ENST00000642138 673 ntBASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms