Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA3Q9Y5H0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.43■□□□□ 0.7
PCDHGA3Q9Y5H0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA3Q9Y5H0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA3Q9Y5H0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA3Q9Y5H0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA3Q9Y5H0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA3Q9Y5H0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA3Q9Y5H0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA3Q9Y5H0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGA3Q9Y5H0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 AC133681.1-201ENST00000465482 601 ntBASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 MTDHP1-201ENST00000605323 784 ntBASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA3Q9Y5H0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGA3Q9Y5H0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGA3Q9Y5H0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.39■□□□□ 0.7
PCDHGA3Q9Y5H0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA3Q9Y5H0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHGA3Q9Y5H0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHGA3Q9Y5H0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA3Q9Y5H0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA3Q9Y5H0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA3Q9Y5H0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PCDHGA3Q9Y5H0 AC012618.2-201ENST00000428058 849 ntBASIC19.39■□□□□ 0.69
PCDHGA3Q9Y5H0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA3Q9Y5H0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA3Q9Y5H0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA3Q9Y5H0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHGA3Q9Y5H0 AC005829.2-201ENST00000571422 1056 ntBASIC19.39■□□□□ 0.69
PCDHGA3Q9Y5H0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.39■□□□□ 0.69
PCDHGA3Q9Y5H0 AC073912.3-201ENST00000624414 853 ntBASIC19.39■□□□□ 0.69
PCDHGA3Q9Y5H0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PCDHGA3Q9Y5H0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms