Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGB1Q9Y5G3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGB1Q9Y5G3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGB1Q9Y5G3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGB1Q9Y5G3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGB1Q9Y5G3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGB1Q9Y5G3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
PCDHGB1Q9Y5G3 MIR939-201ENST00000401314 82 ntBASIC18.29■□□□□ 0.52
PCDHGB1Q9Y5G3 AC097381.1-201ENST00000429019 1296 ntBASIC18.29■□□□□ 0.52
PCDHGB1Q9Y5G3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDHGB1Q9Y5G3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGB1Q9Y5G3 AL162430.1-201ENST00000480705 870 ntBASIC18.29■□□□□ 0.52
PCDHGB1Q9Y5G3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.29■□□□□ 0.52
PCDHGB1Q9Y5G3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGB1Q9Y5G3 AC087623.3-201ENST00000607047 1098 ntBASIC18.29■□□□□ 0.52
PCDHGB1Q9Y5G3 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHGB1Q9Y5G3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PCDHGB1Q9Y5G3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGB1Q9Y5G3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGB1Q9Y5G3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 AIRN-201ENST00000601203 4374 ntBASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB1Q9Y5G3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGB1Q9Y5G3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGB1Q9Y5G3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGB1Q9Y5G3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB1Q9Y5G3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB1Q9Y5G3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PCDHGB1Q9Y5G3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB1Q9Y5G3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHGB1Q9Y5G3 POU5F1P4-201ENST00000413175 1085 ntBASIC18.27■□□□□ 0.52
PCDHGB1Q9Y5G3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHGB1Q9Y5G3 AP001330.3-201ENST00000520123 633 ntBASIC18.27■□□□□ 0.52
PCDHGB1Q9Y5G3 AC008175.2-201ENST00000612840 297 ntBASIC18.27■□□□□ 0.52
PCDHGB1Q9Y5G3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB1Q9Y5G3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB1Q9Y5G3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB1Q9Y5G3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
PCDHGB1Q9Y5G3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.27■□□□□ 0.51
PCDHGB1Q9Y5G3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGB1Q9Y5G3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.27■□□□□ 0.51
PCDHGB1Q9Y5G3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
PCDHGB1Q9Y5G3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
PCDHGB1Q9Y5G3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PCDHGB1Q9Y5G3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB1Q9Y5G3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PCDHGB1Q9Y5G3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGB1Q9Y5G3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB1Q9Y5G3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB1Q9Y5G3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGB1Q9Y5G3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGB1Q9Y5G3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PCDHGB1Q9Y5G3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB1Q9Y5G3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGB1Q9Y5G3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB1Q9Y5G3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB1Q9Y5G3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGB1Q9Y5G3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGB1Q9Y5G3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB1Q9Y5G3 AC061975.6-201ENST00000579045 1553 ntBASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms