Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC28.31■■■□□ 2.12
NRXN3Q9Y4C0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
NRXN3Q9Y4C0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC28.3■■■□□ 2.12
NRXN3Q9Y4C0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC28.3■■■□□ 2.12
NRXN3Q9Y4C0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC28.3■■■□□ 2.12
NRXN3Q9Y4C0 AC022616.7-201ENST00000525383 220 ntBASIC28.3■■■□□ 2.12
NRXN3Q9Y4C0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC28.3■■■□□ 2.12
NRXN3Q9Y4C0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC28.3■■■□□ 2.12
NRXN3Q9Y4C0 KRT8P20-201ENST00000423953 1409 ntBASIC28.3■■■□□ 2.12
NRXN3Q9Y4C0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
NRXN3Q9Y4C0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 C2orf69P3-201ENST00000565542 1120 ntBASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 AL031985.4-201ENST00000642138 673 ntBASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 AL024507.2-201ENST00000606070 2574 ntBASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 AL137013.1-201ENST00000432946 1228 ntBASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC28.29■■■□□ 2.12
NRXN3Q9Y4C0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
NRXN3Q9Y4C0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC28.28■■■□□ 2.12
NRXN3Q9Y4C0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
NRXN3Q9Y4C0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
NRXN3Q9Y4C0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC28.28■■■□□ 2.12
NRXN3Q9Y4C0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
NRXN3Q9Y4C0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC28.28■■■□□ 2.12
NRXN3Q9Y4C0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC28.28■■■□□ 2.12
NRXN3Q9Y4C0 YBX1P10-201ENST00000444752 975 ntBASIC28.28■■■□□ 2.12
NRXN3Q9Y4C0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC28.28■■■□□ 2.12
NRXN3Q9Y4C0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC28.28■■■□□ 2.12
NRXN3Q9Y4C0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC28.28■■■□□ 2.12
NRXN3Q9Y4C0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
NRXN3Q9Y4C0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC28.27■■■□□ 2.12
NRXN3Q9Y4C0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
NRXN3Q9Y4C0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
NRXN3Q9Y4C0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
NRXN3Q9Y4C0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC28.27■■■□□ 2.12
NRXN3Q9Y4C0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
NRXN3Q9Y4C0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC28.27■■■□□ 2.12
NRXN3Q9Y4C0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
NRXN3Q9Y4C0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
NRXN3Q9Y4C0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC28.27■■■□□ 2.12
NRXN3Q9Y4C0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
NRXN3Q9Y4C0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
NRXN3Q9Y4C0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC28.27■■■□□ 2.12
NRXN3Q9Y4C0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC28.27■■■□□ 2.12
NRXN3Q9Y4C0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
NRXN3Q9Y4C0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
NRXN3Q9Y4C0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
NRXN3Q9Y4C0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
NRXN3Q9Y4C0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC28.26■■■□□ 2.12
NRXN3Q9Y4C0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC28.26■■■□□ 2.11
NRXN3Q9Y4C0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC28.26■■■□□ 2.11
NRXN3Q9Y4C0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
NRXN3Q9Y4C0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
NRXN3Q9Y4C0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
NRXN3Q9Y4C0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
NRXN3Q9Y4C0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
NRXN3Q9Y4C0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
NRXN3Q9Y4C0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 AC004980.1-204ENST00000429707 299 ntBASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 ECEL1P2-202ENST00000465689 757 ntBASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 AL121603.2-201ENST00000557373 2117 ntBASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 TSPY14P-201ENST00000303979 915 ntBASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
NRXN3Q9Y4C0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC28.25■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms