Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
RTCBQ9Y3I0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC25.4■■□□□ 1.66
RTCBQ9Y3I0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RTCBQ9Y3I0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC25.39■■□□□ 1.66
RTCBQ9Y3I0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RTCBQ9Y3I0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RTCBQ9Y3I0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RTCBQ9Y3I0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RTCBQ9Y3I0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RTCBQ9Y3I0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RTCBQ9Y3I0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC25.39■■□□□ 1.66
RTCBQ9Y3I0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC25.39■■□□□ 1.66
RTCBQ9Y3I0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC25.39■■□□□ 1.66
RTCBQ9Y3I0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC25.39■■□□□ 1.66
RTCBQ9Y3I0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC25.39■■□□□ 1.65
RTCBQ9Y3I0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
RTCBQ9Y3I0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC25.39■■□□□ 1.65
RTCBQ9Y3I0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.65
RTCBQ9Y3I0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RTCBQ9Y3I0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RTCBQ9Y3I0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RTCBQ9Y3I0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RTCBQ9Y3I0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
RTCBQ9Y3I0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC25.38■■□□□ 1.65
RTCBQ9Y3I0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RTCBQ9Y3I0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC25.38■■□□□ 1.65
RTCBQ9Y3I0 PPP1R14BP5-201ENST00000440334 435 ntBASIC25.38■■□□□ 1.65
RTCBQ9Y3I0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC25.38■■□□□ 1.65
RTCBQ9Y3I0 EGLN1P1-201ENST00000531623 762 ntBASIC25.38■■□□□ 1.65
RTCBQ9Y3I0 AP005242.2-201ENST00000580065 1175 ntBASIC25.38■■□□□ 1.65
RTCBQ9Y3I0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
RTCBQ9Y3I0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RTCBQ9Y3I0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RTCBQ9Y3I0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC25.38■■□□□ 1.65
RTCBQ9Y3I0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RTCBQ9Y3I0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RTCBQ9Y3I0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RTCBQ9Y3I0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
RTCBQ9Y3I0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RTCBQ9Y3I0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RTCBQ9Y3I0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RTCBQ9Y3I0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RTCBQ9Y3I0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RTCBQ9Y3I0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
RTCBQ9Y3I0 ECEL1P2-202ENST00000465689 757 ntBASIC25.37■■□□□ 1.65
RTCBQ9Y3I0 AC026271.3-201ENST00000571884 352 ntBASIC25.37■■□□□ 1.65
RTCBQ9Y3I0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC25.37■■□□□ 1.65
RTCBQ9Y3I0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RTCBQ9Y3I0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC25.37■■□□□ 1.65
RTCBQ9Y3I0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
RTCBQ9Y3I0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RTCBQ9Y3I0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC25.36■■□□□ 1.65
RTCBQ9Y3I0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
RTCBQ9Y3I0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RTCBQ9Y3I0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC25.36■■□□□ 1.65
RTCBQ9Y3I0 TSPY14P-201ENST00000303979 915 ntBASIC25.36■■□□□ 1.65
RTCBQ9Y3I0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC25.36■■□□□ 1.65
RTCBQ9Y3I0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC25.36■■□□□ 1.65
RTCBQ9Y3I0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC25.36■■□□□ 1.65
RTCBQ9Y3I0 C1QL1P1-201ENST00000568105 661 ntBASIC25.36■■□□□ 1.65
RTCBQ9Y3I0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RTCBQ9Y3I0 AL445675.2-201ENST00000620291 557 ntBASIC25.36■■□□□ 1.65
RTCBQ9Y3I0 ABBA01031674.1-201ENST00000635145 728 ntBASIC25.36■■□□□ 1.65
RTCBQ9Y3I0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC25.36■■□□□ 1.65
RTCBQ9Y3I0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RTCBQ9Y3I0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RTCBQ9Y3I0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC25.36■■□□□ 1.65
RTCBQ9Y3I0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
RTCBQ9Y3I0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
RTCBQ9Y3I0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
RTCBQ9Y3I0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
RTCBQ9Y3I0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RTCBQ9Y3I0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
RTCBQ9Y3I0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC25.35■■□□□ 1.65
RTCBQ9Y3I0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RTCBQ9Y3I0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RTCBQ9Y3I0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RTCBQ9Y3I0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RTCBQ9Y3I0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.35■■□□□ 1.65
RTCBQ9Y3I0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RTCBQ9Y3I0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RTCBQ9Y3I0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.34■■□□□ 1.65
RTCBQ9Y3I0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTCBQ9Y3I0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTCBQ9Y3I0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTCBQ9Y3I0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTCBQ9Y3I0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC25.34■■□□□ 1.65
RTCBQ9Y3I0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC25.34■■□□□ 1.65
RTCBQ9Y3I0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC25.34■■□□□ 1.65
RTCBQ9Y3I0 DGCR10-201ENST00000609839 495 ntBASIC25.34■■□□□ 1.65
RTCBQ9Y3I0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC25.34■■□□□ 1.65
RTCBQ9Y3I0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC25.34■■□□□ 1.65
RTCBQ9Y3I0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTCBQ9Y3I0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RTCBQ9Y3I0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTCBQ9Y3I0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC25.34■■□□□ 1.65
RTCBQ9Y3I0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RTCBQ9Y3I0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
RTCBQ9Y3I0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
RTCBQ9Y3I0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms