Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.89■□□□□ 0.46
EXOSC1Q9Y3B2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.89■□□□□ 0.45
EXOSC1Q9Y3B2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 AC010141.2-201ENST00000452426 721 ntBASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 AL358852.1-201ENST00000623174 1268 ntBASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
EXOSC1Q9Y3B2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 AC007322.3-201ENST00000426526 701 ntBASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.87■□□□□ 0.45
EXOSC1Q9Y3B2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 AC093503.3-201ENST00000624917 2352 ntBASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms