Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
RNF6Q9Y252 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF6Q9Y252 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF6Q9Y252 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF6Q9Y252 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF6Q9Y252 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF6Q9Y252 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RNF6Q9Y252 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF6Q9Y252 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
RNF6Q9Y252 MKRN4P-201ENST00000444706 1521 ntBASIC18.8■□□□□ 0.6
RNF6Q9Y252 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
RNF6Q9Y252 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF6Q9Y252 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF6Q9Y252 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF6Q9Y252 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RNF6Q9Y252 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF6Q9Y252 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF6Q9Y252 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.8■□□□□ 0.6
RNF6Q9Y252 AC007322.4-201ENST00000509611 723 ntBASIC18.8■□□□□ 0.6
RNF6Q9Y252 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF6Q9Y252 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RNF6Q9Y252 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF6Q9Y252 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
RNF6Q9Y252 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RNF6Q9Y252 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF6Q9Y252 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF6Q9Y252 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF6Q9Y252 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF6Q9Y252 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF6Q9Y252 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF6Q9Y252 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF6Q9Y252 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF6Q9Y252 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF6Q9Y252 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF6Q9Y252 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF6Q9Y252 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF6Q9Y252 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF6Q9Y252 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF6Q9Y252 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF6Q9Y252 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RNF6Q9Y252 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF6Q9Y252 MIPEPP3-201ENST00000412105 444 ntBASIC18.79■□□□□ 0.6
RNF6Q9Y252 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF6Q9Y252 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF6Q9Y252 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF6Q9Y252 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF6Q9Y252 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF6Q9Y252 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
RNF6Q9Y252 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF6Q9Y252 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF6Q9Y252 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF6Q9Y252 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RNF6Q9Y252 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RNF6Q9Y252 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
RNF6Q9Y252 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF6Q9Y252 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF6Q9Y252 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF6Q9Y252 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
RNF6Q9Y252 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF6Q9Y252 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF6Q9Y252 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF6Q9Y252 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF6Q9Y252 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF6Q9Y252 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF6Q9Y252 AC120498.10-201ENST00000621827 505 ntBASIC18.78■□□□□ 0.6
RNF6Q9Y252 OR10C1-204ENST00000622521 1039 ntBASIC18.78■□□□□ 0.6
RNF6Q9Y252 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF6Q9Y252 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF6Q9Y252 AC008694.1-202ENST00000636953 945 ntBASIC18.78■□□□□ 0.6
RNF6Q9Y252 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF6Q9Y252 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF6Q9Y252 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF6Q9Y252 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF6Q9Y252 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF6Q9Y252 TCF3P1-201ENST00000423021 1937 ntBASIC18.78■□□□□ 0.6
RNF6Q9Y252 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RNF6Q9Y252 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF6Q9Y252 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF6Q9Y252 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF6Q9Y252 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RNF6Q9Y252 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF6Q9Y252 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF6Q9Y252 AC018445.3-201ENST00000624177 1945 ntBASIC18.77■□□□□ 0.6
RNF6Q9Y252 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF6Q9Y252 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RNF6Q9Y252 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF6Q9Y252 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RNF6Q9Y252 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF6Q9Y252 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
RNF6Q9Y252 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RNF6Q9Y252 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.77■□□□□ 0.6
RNF6Q9Y252 AC008175.2-201ENST00000612840 297 ntBASIC18.77■□□□□ 0.6
RNF6Q9Y252 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RNF6Q9Y252 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF6Q9Y252 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RNF6Q9Y252 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RNF6Q9Y252 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF6Q9Y252 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF6Q9Y252 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF6Q9Y252 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms